| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3117 |
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| Symbol | |
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| ID | 4014197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3290914 |
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| End bp | 3292041 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637942784 |
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| Product | porin |
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| Protein accession | YP_549929 |
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| Protein GI | 91788977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0494554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.199472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT CCTCCCTTAT CACCCTGACC GGACTGGCCG GACTGGTCGC CACAGGTGCT
GCTCAAGCTC AAAGTGTCAG CCTTTACGGC ATCATCGATG CCGGCGTCGA GTCTGTCAGC
AACGTGGCAT CAGCCGGCGG CCGCATCACG CGCATGCCCT CCAATACCGG CATCCTTCCT
TCTCGGGTGG GCATGCGTGG CACAGAAGAT CTTGGCGCTG GCTTGAGCGC CATCTACACG
CTTGAAATGG GTTTTGCCCC GGACACAGGC GCTTCGGGCC AAGGTGGCCG TCTATTCGGG
CGCCAGTCGA CGGTGGGACT CAGTGGTAAC TGGGGCGCGG TCACGCTGGG CCGTCAATGG
ACCATGCTGT TCTGGTCCCT GCTGGATTCG GATATTGTGG GGCCCAGCAT CTATGGACTC
GGCTCTCTGG ACAACTACAT CCCCAATTCA CGCATCGATA ATTCAATTGC GTACAAAGGC
AAATTCAGCG ACTTCACCGT AGGCGCTACC TACAGCCTGG GCCGTGACAC CGTCAATGCA
GGTCCATCGC CTGCCGGCAC CAATTGCCCA GGCGAAAGCG GGGCTGATTC CAAGGCATGC
CGCGAGTGGT CGGCCATGGT GAAATACGAC ACCAAGACCT GGGGCGCAGC ATTGGCTTAT
GACGAACTGA ACGGCCGCAC GCCTGCCAGC GCTACGGATG TGGTGCTGCC TGCCGGCCTG
ACCAGCAGTT CCAAATCCGA CTCCCGGCTG ATGGTGAACG GCTACGTGAA CCTGGCCAGC
GTCAAAGTCG GCGGTGGTGT CATTCGCCGT AACAACGACG GCAGCGCGAC GCGACCCAAA
AGCGACCTTT GGTACGTCGG AGCCTCTTAC CCAGTCTCTC CGGCCTGGAC GATTGACGGA
ACTCTCGCCA AGCTGAACTA CAAGAACGTC GACAACTTTG ACTCCACCCT GCTGGCGGTG
CGATCGCTGT ACAAGTTATC GAAGCGCACG ACCTTGTACG CTCAAATCGG CACGATTCGC
AACGATAGCC AGACCAACGT TTCTGTCAGT GGCGGTGCAC CTGGCAGCAA CCCCGCTTTG
GGTGGATCGC AGACCGGGAC GATGGTGGGC ATCAACCACA AGTTCTAA
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| Protein sequence | MKISSLITLT GLAGLVATGA AQAQSVSLYG IIDAGVESVS NVASAGGRIT RMPSNTGILP
SRVGMRGTED LGAGLSAIYT LEMGFAPDTG ASGQGGRLFG RQSTVGLSGN WGAVTLGRQW
TMLFWSLLDS DIVGPSIYGL GSLDNYIPNS RIDNSIAYKG KFSDFTVGAT YSLGRDTVNA
GPSPAGTNCP GESGADSKAC REWSAMVKYD TKTWGAALAY DELNGRTPAS ATDVVLPAGL
TSSSKSDSRL MVNGYVNLAS VKVGGGVIRR NNDGSATRPK SDLWYVGASY PVSPAWTIDG
TLAKLNYKNV DNFDSTLLAV RSLYKLSKRT TLYAQIGTIR NDSQTNVSVS GGAPGSNPAL
GGSQTGTMVG INHKF
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