Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3108 |
Symbol | |
ID | 4014227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3280907 |
End bp | 3281818 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942775 |
Product | gluconolactonase |
Protein accession | YP_549920 |
Protein GI | 91788968 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0128132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.989225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCC TCACGGACGC GACGCGGGCC GAGCTGCTGC TCGATGCGCG CAATGCCACG GGCGAAAGCC CGGTCTGGCA TGCCGCCGAG CAGGCGCTGT ATTGGGTCGA CATTCCGGCG CGCAAGCTGT GCCGCTGGGA GGCCGCAACA GGGCGCACCA GCCACTGGCT GGCGCCTGAA ATGCTCGCTT GCATTGCCCC GCGGGGCACG CAGTCGGGCT GGGTGGCGGG CATGGAAACT GGCGTATTCG AATTGCAGCC GCATGATGGC GGCCGTCTTG ATGTCCGGCT GCTGGCCGGG GTGCGGCATG CGCAGGCTGG CATGCGCTTC AACGACGGCC GCTGCGACCG CCAGGGGCGC TTCCTGGCCG GCACCATGGT GCTCGATATG GCTCTCGGTT CCCGTGCGGG TTGCCTCTAC AGCCATGAAA AAAATGGCGA GCTGAGAAAC CTCCTGAGCG GCTTCATCAC GCCCAATGGC CTGGCTTTCA GCCCTGACGG GCGCACCATG TACCTGTCGG ACTCCCATCC GTCAGTGCAG ACCATCTGGG CCTTCGATTA CGACACCGAC ACCGGCACGC CCACGAACCA GCGGGTGTTT GTTGACATGA AGCCGCTGCC GGGGCGACCC GATGGCGCCG CTGTCGACGA GGAGGGCTGT TACTGGATTT GCGGCAACGA TGCCGGTCTG GTTCACCGCT TCACGCCTGC GGGCAAGCTG GACCGCTCCA TTGCAGTTCC GGCCGCGAAG CCTTCGATGT GCTGCTTCGG CGGCGCACGC ATGGACCAGC TCTTCATCGC CTCCATCACC CCCGCGCAAC CTATCGCCGG CTATGAGCCC GCGCTGGCGG GCGCGGTGTT CGTGGCCCAT CCCGGCGTTC GCGGCATTGC CGAAACGCCG TTTTCGCAGT AG
|
Protein sequence | MSTLTDATRA ELLLDARNAT GESPVWHAAE QALYWVDIPA RKLCRWEAAT GRTSHWLAPE MLACIAPRGT QSGWVAGMET GVFELQPHDG GRLDVRLLAG VRHAQAGMRF NDGRCDRQGR FLAGTMVLDM ALGSRAGCLY SHEKNGELRN LLSGFITPNG LAFSPDGRTM YLSDSHPSVQ TIWAFDYDTD TGTPTNQRVF VDMKPLPGRP DGAAVDEEGC YWICGNDAGL VHRFTPAGKL DRSIAVPAAK PSMCCFGGAR MDQLFIASIT PAQPIAGYEP ALAGAVFVAH PGVRGIAETP FSQ
|
| |