Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3092 |
Symbol | |
ID | 4014250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3259747 |
End bp | 3260805 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637942759 |
Product | extracellular solute-binding protein |
Protein accession | YP_549904 |
Protein GI | 91788952 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00849212 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.375383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAA AAGCTCCTTC ACTGGCCTGC CTTGCGCTGG CCACCGCAGC CTTCTTTGGC GCCGTGGGCA ACGTCAACGC CCAGGAGCAG GTCGTCAACC TGTATTCTGC ACGCCACTAC CAGACCGACG AAGCGCTGTA CACCAACTTC ACCAAGGCTA CCGGCATCAA GGTCAACCGT GTCGATGCCG ATGATGCCGG CATTCTGGCG CGCCTGAAAG CCGAGGGTAC GGCCTCGCCT GCCGACGTGA TTTTGCTGGT CGATGCCGCC CGCTTGTGGA AAGGCGACGT GGAAGGCCTG TTCAAGCCCA TCAAGTCGGC CGCTCTGGAA GCCGCCATTC CGGCCAAGCT GCGCGCCCGG GAAACCGCCG AAGGCACCAC GTGGTTCGGC TTTTCCACCC GGGCCCGCGT GGTGGTGTAT GACAAGCTGA AAGTCAAGAA AGCCGACGTG GACACCTACG AAGAGCTGGC CGATCCGAAA AACAAGGGCC TGCTGTGCAC CCGCTCGGGC TCGCACCCCT ACAACCTCTC GCTGTTTGGC GCCGTGACCG AGCACCTCGG CGAGGCCAAA GCGGAGGCCT GGCTCAAGGG ACTGGTGGCC AACATGGCAC GCGACCCGAA GGGCGGCGAC ACGGATCAGA TCAAGGCAGT GGCCAGCGGC GAGTGCGGCA TCGCACTGAC CAACACCTAC TACCTGGCGC GCATCATGCG CTCCAGTACG CCTGAAGACA AAACGGTAGC CGACCGCGTC GGCGTGGTGT TCCCCAACCA GGACAGCTGG GGCACGCATG TGAACATTGC GGGTGCAGCC GTTGCCAAAA ATGCCAAGAA TACCGCCAAC GCCATCAAGT TCATGGAGTA CATGGCCAGC GCGGAGGCAC AAAACTACTT TGCCAACGGC AACAACGAAT GGCCTGCCGT GTCCAGCGTG AAAGTCAGCA ACCCCGCGCT GCAAGCCATG ACGGGCGGCA GCTTCAAGTC GGAAACCATT CCCATCAGCG CCGTGGGCGG CAACCAGCTG AAAGTACAGC AGATGCTTGA TCGCGTCGGT TATAAGTAA
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Protein sequence | MFKKAPSLAC LALATAAFFG AVGNVNAQEQ VVNLYSARHY QTDEALYTNF TKATGIKVNR VDADDAGILA RLKAEGTASP ADVILLVDAA RLWKGDVEGL FKPIKSAALE AAIPAKLRAR ETAEGTTWFG FSTRARVVVY DKLKVKKADV DTYEELADPK NKGLLCTRSG SHPYNLSLFG AVTEHLGEAK AEAWLKGLVA NMARDPKGGD TDQIKAVASG ECGIALTNTY YLARIMRSST PEDKTVADRV GVVFPNQDSW GTHVNIAGAA VAKNAKNTAN AIKFMEYMAS AEAQNYFANG NNEWPAVSSV KVSNPALQAM TGGSFKSETI PISAVGGNQL KVQQMLDRVG YK
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