Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3091 |
Symbol | |
ID | 4014249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3258709 |
End bp | 3259605 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637942758 |
Product | patatin |
Protein accession | YP_549903 |
Protein GI | 91788951 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0120977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.361961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGG CTTGGGCCTT GGTGTTGCTG GCGGGGTGCG CTGCGCCACC CGCTCCACCG GTGCGATCCG CCCCATCCAC GCCGACGGCC GAGGCCGTCC CGAAAAAGCC TTTGAAAATC GGCCTGGCGC TGGGTGGCGG TGCGGCGCGG GGCTTTGCCC ATGTGGGCGT GATTGCGGTG CTTGAAGAGG CCGGGCTCAA GCCTCATTAT GTGGTCGGCA CCTCGGCTGG CAGCCTGGTC GCCGCACTTT ATGCCAGCGG TAGAACCAGT GCCCAACTGC AGCAGACCGC CTTGAACATG CAGGAGGTCG CCATCACCGA CTGGATGCTG CCGATTGTGG GCCGGGGCAT GTTTCGCGGC GAGGCCCTGG CACGGCATGT CAATGAATTG CTGGCGGGCC GCCTGATTGA AGACATGCCC GTTCCGCTGG GCATTGTGGC TACCGACCTC AACAGCGGTC AGGCCGTGCT GTTCCAGCGC GGCGACACCG GCACGGCGGT GCGGGCATCG AGCGCTGTTC CGGCAGTCTT CGTGCCGGTC AGGATCAATG GCCGGGAGTA TGTCGATGGC GGCCTGGTCT CGCCGGTGCC GGTGCGTTTT GCGCGGCAAA TGGGCGCCGA CCTGGTGATT GCGGTCGATA TCTCCAGCCC GCCGGAGGCC AACCCGGCCG GCGATACGCT GCAGATACTG CTGCAGACCT TTGCCATCAT GGGCAAAAGC ATCAACCAGT ATGAACTGAA GGATGCCGAT GTGGTGGTGC GGCCGTCCCT GGCCGGCCTG AAGAGCGCCG ACTTCTCGGC CCGGCAACGC GCTATCGATT TGGGTCGGGC CGCCATGCTC GCGGCGCTGC CCGCGCTGCG GGCCAAACTG GACGCCGGGG CGGTGCCGGC GCATTGA
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Protein sequence | MALAWALVLL AGCAAPPAPP VRSAPSTPTA EAVPKKPLKI GLALGGGAAR GFAHVGVIAV LEEAGLKPHY VVGTSAGSLV AALYASGRTS AQLQQTALNM QEVAITDWML PIVGRGMFRG EALARHVNEL LAGRLIEDMP VPLGIVATDL NSGQAVLFQR GDTGTAVRAS SAVPAVFVPV RINGREYVDG GLVSPVPVRF ARQMGADLVI AVDISSPPEA NPAGDTLQIL LQTFAIMGKS INQYELKDAD VVVRPSLAGL KSADFSARQR AIDLGRAAML AALPALRAKL DAGAVPAH
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