Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3086 |
Symbol | |
ID | 4014244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3254578 |
End bp | 3255021 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637942753 |
Product | thioesterase superfamily protein |
Protein accession | YP_549898 |
Protein GI | 91788946 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000791205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0550819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC CGATGCGCCC CCAGGCAGAG CCCCGCAGTG CCTACAAAGC TTTTCGCGAC ATCGGCACGC GCTGGTCCGA CAACGATCTG TATGGCCACG TCAACAACGT CGTTTACTAC AGCTGGTTTG ACACGGCCGT CAACGGTTTG CTGATTGAAC GCGGTGCCCT TGACATTCAC GCGGGCAGCG TGATTGGCCT GGTGGTCGAG ACCCAGTGCA ATTACTTCGC CCCTCTCGCG TTTCCCGAGC CGGTGGTGGC GGGCATCCGG GTGGCCCGCG TGGGCGCGTC CAGTGCGCGC TACGAGGTGG CGCTGTTCCC GCAGGATGAT GCGCAGGCGT GTGCGGCCAA AGGCCATTTC ATCCATGTGT ATGTCGACCG CGCCACGCGC CGCCCGGTGC CCTTGCCCCC TCAATTACTT TGCGTACTGG AGACCCTCAA GTGA
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Protein sequence | MTSPMRPQAE PRSAYKAFRD IGTRWSDNDL YGHVNNVVYY SWFDTAVNGL LIERGALDIH AGSVIGLVVE TQCNYFAPLA FPEPVVAGIR VARVGASSAR YEVALFPQDD AQACAAKGHF IHVYVDRATR RPVPLPPQLL CVLETLK
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