| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3078 |
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| Symbol | |
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| ID | 4014236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3246111 |
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| End bp | 3247097 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637942745 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_549890 |
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| Protein GI | 91788938 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.431872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.295585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC CCAAAATTCT GGTCGCACGA GCCGTCTTTC CTGAAGTGAT TGCCCGCCTG
GAGCAGCATT TCGAGGTGCA GGCCAACCAG GACGACCAAA CCTGGTCCAA GGCCGAACTC
ACGGAACGCC TGCGTGACAA GGATGGTGCT TTCACCACCG GCGGTGACCG CATTGACGCA
GAGGTTCTTG CGGCTTGTCC CCGGCTCAAG ATCTGCGCCA ACATGGCCGT GGGCTATAAC
AACTTTGATG TCGATGCCAT GACGGCGGCC AGGGTGCTGG CCACCAATGC CCCCGATGTG
CTGACCGAAA CCACGGCGGA CTTCGGCTTT GCGTTGCTGA TGGCCACCGC CCGCCGCATC
ACCGAGAGCG AGCACTACCT GCGTGCCGGA AAATGGACCA AGTGGAGCTA CGACATGTTT
GCCGGCTCCG ACATCCATGG CGCCACGCTG GGCATTCTGG GCATGGGCCG CATCGGGCAG
GGCATCGCCA AACGAGGTGC GCTGGGTTTC GGCATGAAGG TGATTTACCA CAACCGGTCC
CGCCTGGAGG CCGCACTGGA AGCGGAATGC CTGGCCAGTT ATGTGAGCAA GGATGAGCTG
CTCAAGACCG CCGACCACCT GGTGCTGGTG CTGCCGTACT CGCTGGCCTC ACATCACACC
ATAGGCGCGG CCGAGCTGGC CCTGATGAAG CCGACGGCCA CGCTGATCAA CATTGCGCGC
GGCGGCATCG TGGATGACGC CGCCTTGGCC GCTGCCTTGC GTGACAGGCG CATCGCCGCT
GCCGGCCTGG ATGTGTTTGA AGGCGAGCCC AAGGTGCATC CTGACCTGCT GACCGTGCCC
AATGTGGTGC TGACGCCCCA CATCGCCAGC GCCACCGTGC CCACACGACT GGCGATGGCC
AACCTGGCGG CCGACAACCT GATTGCTTTC TTCGATGGAA AAAAGCCCCT GACTCCGCTG
AATCCTGCGG TGTTGACTGT CCAATAA
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| Protein sequence | MSKPKILVAR AVFPEVIARL EQHFEVQANQ DDQTWSKAEL TERLRDKDGA FTTGGDRIDA
EVLAACPRLK ICANMAVGYN NFDVDAMTAA RVLATNAPDV LTETTADFGF ALLMATARRI
TESEHYLRAG KWTKWSYDMF AGSDIHGATL GILGMGRIGQ GIAKRGALGF GMKVIYHNRS
RLEAALEAEC LASYVSKDEL LKTADHLVLV LPYSLASHHT IGAAELALMK PTATLINIAR
GGIVDDAALA AALRDRRIAA AGLDVFEGEP KVHPDLLTVP NVVLTPHIAS ATVPTRLAMA
NLAADNLIAF FDGKKPLTPL NPAVLTVQ
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