Gene Bpro_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3052 
Symbol 
ID4014282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3218635 
End bp3219351 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID637942717 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_549864 
Protein GI91788912 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCC AATTTGGCCT TGCCAACGTC TGGAGCCAGG GCGACATCGT CACCAAATCG 
GTCGCACTGC TGCTGCTCGC CATGTCGCTC GCCTCGTGGA TGGTCATCAT CATCAAGACG
CTGGACCTGA TCAAGTACAA GAAAATCGCC AGGGCTGCTG AAGACTTCTG GCACAGCGAA
GATTTCGCAG CCGGCCTGAC CAAGCTGGGC GCAGACCCCA CCAACCCGTT CCGTCAGCTG
GCACTGGAGG GTCGTGAGGC CACGCTTCAT CACCGCAACA CCAAGGCGCA TCTGCATGAT
GCGCTGGATG TGAGCGACTG GGTCACGCGC ACGCTGCGCA ACACCATCGA CGAATTCACC
GCCCGGCTGC AGTCCGGTCT GGCCGTCCTC GCTTCCGTAG GCTCCACCGC CCCGTTCATT
GGCCTCTTCG GCACCGTCTG GGGCATTTAC CACGCGCTGT TGTCCATAGG CGCGGCAGGC
CAGGCGACCA TCGACAAGGT GGCAGGCCCC ATCGGCGAGT CGCTGATCAT GACGGCACTC
GGCCTGGCCG TGGCGATTCC GGCGGTGCTG GGTTACAACG CACTGGTGCG CGGCAACAAG
GGCATTTTGC AAAAACTCAG CCGCTTTGCC CACGACCTGC ACGCCTACTT TGTGACCGGT
GCACGCATCA CCACCAGCAA CGGCCCGGCC AATGTCGTGC CCATGAAGAA AGCCTGA
 
Protein sequence
MNSQFGLANV WSQGDIVTKS VALLLLAMSL ASWMVIIIKT LDLIKYKKIA RAAEDFWHSE 
DFAAGLTKLG ADPTNPFRQL ALEGREATLH HRNTKAHLHD ALDVSDWVTR TLRNTIDEFT
ARLQSGLAVL ASVGSTAPFI GLFGTVWGIY HALLSIGAAG QATIDKVAGP IGESLIMTAL
GLAVAIPAVL GYNALVRGNK GILQKLSRFA HDLHAYFVTG ARITTSNGPA NVVPMKKA