| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2857 |
|---|
| Symbol | |
|---|
| ID | 4014469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3012245 |
|---|
| End bp | 3012967 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637942520 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_549670 |
|---|
| Protein GI | 91788718 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.164857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCAAA AACCAACCTC TCATCCTTAC AAGCCCAACA TGACTCAAGA CGAACTCAAA
GCCCTGGTCG GCCAGGCCGC CCTGCCATAC GTGGAACCCG GCAGCATTGT CGGCGTGGGC
ACCGGCTCCA CTGTCAACAA ATTCATAGAT GCACTGGCAA CGATGAAGGA CCGCATTGCC
GGCGCGGTCT CCAGTTCGGT GGCGTCTACC GAACGTCTGC AGGCCATCGG CATCAAGGTG
TTTGATGCCA CTGAGGTGGA TGAGCTGGCC GTGTACATCG ACGGAGCCGA CGAGATCGAC
CACGCGGGCT ACATGATCAA GGGTGGTGGC GCAGCGCTCA CGCGCGAAAA AATCGTGGCG
GCCCAGTCAC GCAAATTTGT CTGTATTGCC GACGAGTCCA AACTGGTGCA AACGCTGGGC
AGCTTTCCCT TGCCGGTGGA GGTGATTCCG ATGGCCGCCA GGCGCATTGC TCGCCAGTTT
GCCGCGCTGG GCGGTACGGC GACCTTGCGG TCTAAAGGTG GAGCGGAGAG CGGCGAACCG
CTGGTGACCG ACAACGGCCA GCATATTCTG GACGTGACGG GCCTGAAGAT CACCGACCCC
TTGGGGTTTG AGTCCCAGGT AAACCAGTGG CCAGGGGTTG TTACGGTGGG GGTGTTTGCC
TTCCAGAAGG CTCATGTGTG CCTGCTGGGG GCGTCGGACG GTGTCAGGAC CCTGGTGTTT
TAA
|
|---|
| Protein sequence | MSQKPTSHPY KPNMTQDELK ALVGQAALPY VEPGSIVGVG TGSTVNKFID ALATMKDRIA
GAVSSSVAST ERLQAIGIKV FDATEVDELA VYIDGADEID HAGYMIKGGG AALTREKIVA
AQSRKFVCIA DESKLVQTLG SFPLPVEVIP MAARRIARQF AALGGTATLR SKGGAESGEP
LVTDNGQHIL DVTGLKITDP LGFESQVNQW PGVVTVGVFA FQKAHVCLLG ASDGVRTLVF
|
|---|
| |