| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2853 |
|---|
| Symbol | |
|---|
| ID | 4014503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3008030 |
|---|
| End bp | 3008773 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637942516 |
|---|
| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
|---|
| Protein accession | YP_549666 |
|---|
| Protein GI | 91788714 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0293] 23S rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA ATCCCAAGAA CAGCCCCAAG GACAACCTCA AAGACAGCCC AAAGGTGAGC
GCCAGGGGCA AAAAGGTGAA CAAAGCGTGG TTGCATGACC ACATCAATGA TCCTTACGTG
AAACTGGCCC AAAAAGAGGG CTACCGCGCC CGGGCCGCCT ACAAACTCAA GGAAATTGAC
GAAACCCTGG GCCTGATCAA GCCGGGTGAT TGCGTGGTGG ACCTGGGCAG CACGCCCGGC
GCCTGGAGCC AGTATGTGCG GCGCAAGCTG TCGCCCACGG GCGCTGCGGC GGGAGAACTG
AATGGCCGCA TCATCGGCCT GGACATGCTG CCGATGGAGC CCATCGAGGG GGTGGCGTTC
ATCCAGGGCG ATTTTCGGGA GCCCGAAGTG CTGCAGAAAC TGGAGCAGGC TTTGGCGACG
GACAAGGGTC AGGTCAAGGT TGACCTGGTT ATTTCGGACA TGGCCCCGAA TCTTTCGGGC
ATTGAATCGG CGGATGCCGC ACGCATTGTC CACCTGGTCG AGCTGGCGGT GGAATTTGCC
CAGAACCGGA TGAAACCGGA CGGCACGCTG GTGGTCAAAC TGTTTCACGG CAGCGGCTAT
GACGAGCTGG TCAAACTGTT CCGGGCCACC TTCAAGGTGG TCAAACCCAT GAAGCCCAAA
GCCTCGCGTT CCAATTCTTC CGAAACCTTT TTGGTCGGCA AGGGGCTGAA AAAGCGGGCG
GAAACAGTGC CCGAACTGGC CTGA
|
|---|
| Protein sequence | MKVNPKNSPK DNLKDSPKVS ARGKKVNKAW LHDHINDPYV KLAQKEGYRA RAAYKLKEID
ETLGLIKPGD CVVDLGSTPG AWSQYVRRKL SPTGAAAGEL NGRIIGLDML PMEPIEGVAF
IQGDFREPEV LQKLEQALAT DKGQVKVDLV ISDMAPNLSG IESADAARIV HLVELAVEFA
QNRMKPDGTL VVKLFHGSGY DELVKLFRAT FKVVKPMKPK ASRSNSSETF LVGKGLKKRA
ETVPELA
|
|---|
| |