| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2817 |
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| Symbol | |
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| ID | 4014506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2961907 |
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| End bp | 2963619 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637942481 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_549631 |
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| Protein GI | 91788679 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.109002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAC AACTTGCGGG CCACCTTCTC GTTGACTGCC TGATTGCCCA GGGCGTTACC
CATGCGTTTG GCGTTCCCGG TGAAAGCTAC CTCGCCGTCC TTGATGGCTT GCATGCACGC
CAGGGCCAGA TTGAATTCAT CACCTGCCGC CAGGAAGGCG GTGCTGCCTT CATGGCCGAG
GCGCACGGCA AGCTCACCGG CCGGCCGGGC GTTTGCATGG TGACGCGCGG ACCGGGTGCT
ACCAACGCTT CCATCGGTGT CCACACCGCG TTTCAGGACT CGACGCCCAT GGTGCTGCTG
GTGGGCGATG TGGCCAGCGA CTGCCGCGAC CGGGAAGCTT TTCAGGAGGT GGATTACGCC
AGCTTTTTCG GGCCGAGCAC CAAGGGCTTT GCCAAACGCG TGGAGCGCAT CGACGATGCG
GACCGCATTC CGGAGTATGT GGCGCGCGCC TTTGCGACGG CCGTGAACGG CCGGCCCGGC
CCGGTCGTGC TGGTATTGCC TGAAGACATG CTGACGCAGA TGACCGGCGC CCAGCCCTTG
CCCCGCGTGG AGGCGGTCCA GGCCTGGAGC GACCCCGGTT CCGTGCGTAC GCTGCGCGAG
ATGCTGCTCC AATCGCAGCG GCCGTTTGTC ATTGCCGGAG GCGGCGGCTG GACGCCGCAG
TCGGCGCAGG CACTGCAGCG CTTTGCCGAA AACTGGAAGC TGCCGGTGGG CAACGCCTTT
CGTTTCCAGG ACACGTTTGA CAACCACCAC CCGCAATATG CCGGTGACGT GGGCATCGGC
CTGAACCCCA AACTGGCAGC GCGTATCAAG GCCAGCGACC TCATCATCGC CATCGGCCCG
CGCCTGGGGG AAATGACGAC CGGCAATTAC ACCTTGCTGG AGGCACCTCG GCCCCGGCAG
AAGCTGGTGC ACATCCACTC CAGCGCCGAA GAACTCAACC GCGTCTACCA GGCCGACCTG
GCCATCAACG CCACCATGAA TGCCGCTGCG CGCTCGCTGG AGGTGCTAAC GGCACCAGCC
GAGTTGCCCT GGGAGGCCTG GACCGCATCG GCCAACAACG ATTACCTGGC CAACCTGCAA
ACCCAGGAAG GGCAAAAGCT GCCCGGCGAT ATCGACATGG CGGCCATCGT CGGCCTGTTG
CAAAAGCATT TGCCGCAAGA TGCGGTACTG ACCAATGGCG CGGGCAACTT TGCCAGCTGG
GTGCACCGGT TTTTCAAACA CCACGGGCTG GTCAAAGGGA ACAAGACGCA ACTGGCGCCC
ACTGTGGGCG CCATGGGCTA TGGCGTGCCG GCCGGCATCG CGGCCAATAT CGTCTCGGGC
CGAACGGCCT TCACCATTGC CGGGGACGGT GACTTCCTGA TGAATGGCCA GGAGCTGGCG
ACAGCCGTTC AGCACGGCGC CAAAAGCATC ATCGTGCTGC TCAACAACGG CATGTACGGC
ACCATTCGCA TGCACCAGGA AAAGACGTAT CCGCAGCACG TGAGCGGCTC GCGCCTGAAC
AACCCGGACT TTGCCGCCCT GGCACGCGCC TACGGTTATG CGGGTGTTCG CATCACGCGG
ACCGCCGAAT TTGAAGCCGA ACTGCTGGCC GCGCTGGCGC GCAAGGAAGG CACGGTGATC
GAGGTGACAC TGGATCCTGA GGTCATCACC ACGCGGGGCA CGCTGTCATC GATTACCCAG
GCTGCATTGA CTCAGTCGCT GCAAAAATCA TAG
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| Protein sequence | MTTQLAGHLL VDCLIAQGVT HAFGVPGESY LAVLDGLHAR QGQIEFITCR QEGGAAFMAE
AHGKLTGRPG VCMVTRGPGA TNASIGVHTA FQDSTPMVLL VGDVASDCRD REAFQEVDYA
SFFGPSTKGF AKRVERIDDA DRIPEYVARA FATAVNGRPG PVVLVLPEDM LTQMTGAQPL
PRVEAVQAWS DPGSVRTLRE MLLQSQRPFV IAGGGGWTPQ SAQALQRFAE NWKLPVGNAF
RFQDTFDNHH PQYAGDVGIG LNPKLAARIK ASDLIIAIGP RLGEMTTGNY TLLEAPRPRQ
KLVHIHSSAE ELNRVYQADL AINATMNAAA RSLEVLTAPA ELPWEAWTAS ANNDYLANLQ
TQEGQKLPGD IDMAAIVGLL QKHLPQDAVL TNGAGNFASW VHRFFKHHGL VKGNKTQLAP
TVGAMGYGVP AGIAANIVSG RTAFTIAGDG DFLMNGQELA TAVQHGAKSI IVLLNNGMYG
TIRMHQEKTY PQHVSGSRLN NPDFAALARA YGYAGVRITR TAEFEAELLA ALARKEGTVI
EVTLDPEVIT TRGTLSSITQ AALTQSLQKS
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