Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2816 |
Symbol | |
ID | 4014505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2959984 |
End bp | 2961621 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637942480 |
Product | extracellular solute-binding protein |
Protein accession | YP_549630 |
Protein GI | 91788678 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.54552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0589435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAGA CCAAACCAAG TGCAAGCCGG CTACGCCCGG TCCAGCGCGC ATTGCTGTGC GCGATCGCCC TGCCAGCATT GCTGGCGCTC ACGCCGGCGT CCGCCAAGAC GCTGGTGTTC TGCTCTGAAG GCAGTCCTGA AAACTTCTAC CCCGGTATCA ACACCACGGG TACCTCGTTT GATGCCAACG AACCCATCTA CAACCGTATC GTGGAGTTTG AGCGTGGCGG CACCAAGGTA ATGCCGGGAC TGGCCGAGAA ATGGGATATC TCTGCCGATG GCAAGGAATA CACCTTCCAT CTGCGCAAAG GCGTGAAATG GCATAACACC AGCAAGAGCT TCAAGCCCAC CCGCGACTTC AATGCCGACG ACGTACTGTT CATGTTCGAG CGTCAGTGGA AAGAAGACAA CCCATTCTTC AAGGTCACCA GTCCCAACCA CTCCTACTTC AGCGACATGG GCATGCCCAA GCTGCTGAAA TCGGTGCAAA AAGTCAACGA CTACACCGTC AAGATCACGC TCGACAAACC TGAAGCACCG TTCCTGTCCA ACCTGGCCAT GCCTTATGCA GCGGTGCAGT CCAAGGAATA TGCCGACGCC ATGCTCAAGG CCGGCACCCC CGAAAAAATT GACCAGGATC CTGTTGGAAC CGGCCCCTTC TACCTGGTGC AATACCAGAA AGACGCGATC ATCCGTTACA AGGCCTTCCC TCAGCATTTT GCGGGCAAAG CCAAGATCGA CGACCTCGTC TACGCGATCA CGCCGGACGC CTCGGTGCGA TGGGCGAAGC TGCAAAAAGG CGAGTGCCAT GTGATGCCCT ACCCGGCTCC GGCTGACCTC GAAGCCATCC GCAAGGACCC GAATATCCAG GTCATCGAGC AACCCGGTTT GAACGTAGGG TATCTGGCTT ACAACACCAC GAAAAAGCCG TTTGATGACG TGCGCGTGCG CAAGGCCATC AACATGTCCA TCAACAAGAA AGCCATTGTT GACGGCGTGT ACCTCGGCAC CGGCATTCCC GCGAAAAACC CGATTCCACC GTCGATGGCT GCCTACAACG ACAGCATCAA GGACGACGCC TACAACCCTG AAGCCGCCAA AAAACTCCTG GCAGAAGCAG GCTACCCGAA CGGCTTCACC ACCGATTTGT GGGCCATGCC GGTGCAGCGC CCCTACAACC CCAACGCCAA ACGCATTGCC GAGCTGATGC AGGCGGACCT GGTCAAGGTG GGCGTCACGG CCGAGATCAA GAGCTTTGAG TGGGGCGAGT ACCGCAAGCG CCTGCAGGCC GGCGAGCACC AGATGGGCAT GCTGGGCTGG ACCGGCGACA ACGGCGATCC GGACAACTTC ATGTACACCC TGCTTGGTTG CGCTTCAGCC CAGTCCGCCA GTGGTTCCAA CATCGCCAAG TTCTGCTACC AGCCTTATGA AGATCTGGTC CTGAAAGCCA AGACCGTCAC CAACCCGGCC GAGCGCACCA AGCTGTACCA GCAGGCCCAG GTGATCTTCA AGGAGCAGGC GCCCTGGTTC ACGATTGCCC ATGCGGTGCA GCTCAAGCCG GTACGCAAGA GCGTGATCGA CTTCAAGAAC AGCCCATTCG GCCGACACAA CTTCTACGGC GTCGACATCA AGGAATAA
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Protein sequence | MIQTKPSASR LRPVQRALLC AIALPALLAL TPASAKTLVF CSEGSPENFY PGINTTGTSF DANEPIYNRI VEFERGGTKV MPGLAEKWDI SADGKEYTFH LRKGVKWHNT SKSFKPTRDF NADDVLFMFE RQWKEDNPFF KVTSPNHSYF SDMGMPKLLK SVQKVNDYTV KITLDKPEAP FLSNLAMPYA AVQSKEYADA MLKAGTPEKI DQDPVGTGPF YLVQYQKDAI IRYKAFPQHF AGKAKIDDLV YAITPDASVR WAKLQKGECH VMPYPAPADL EAIRKDPNIQ VIEQPGLNVG YLAYNTTKKP FDDVRVRKAI NMSINKKAIV DGVYLGTGIP AKNPIPPSMA AYNDSIKDDA YNPEAAKKLL AEAGYPNGFT TDLWAMPVQR PYNPNAKRIA ELMQADLVKV GVTAEIKSFE WGEYRKRLQA GEHQMGMLGW TGDNGDPDNF MYTLLGCASA QSASGSNIAK FCYQPYEDLV LKAKTVTNPA ERTKLYQQAQ VIFKEQAPWF TIAHAVQLKP VRKSVIDFKN SPFGRHNFYG VDIKE
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