| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2782 |
|---|
| Symbol | |
|---|
| ID | 4014548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2923268 |
|---|
| End bp | 2924143 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637942446 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_549596 |
|---|
| Protein GI | 91788644 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.732932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.160531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGCA TCGCCGGTTG GCTGGTTTTG CTGTGCCTGG TGCTGGCGGC GCCGGTCCGC
GCCTTGCCCT TGCAATTGAC TGATGACCGC GGCGTGACCC TCACGTTTGC GCAGTCACCG
CAGCACATCG TCAGCATGCT GCCTTCGCTG ACCGAAAGCG TTTGCGCGCT CGATCAGTGC
CATCGCCTTA TAGGGGTGGA TCGTTATTCC AACTACCCGG CCAGCGTGAA GCGCCTGCCC
GTGCTGGGCG GCGGGATCGA CCCCAACATC GAGGGCATCG TGGCGCTCAA GCCCGATGTG
GTCCTGGTGG CCACATCTTC CCGGGCCACC GGCCGGCTGG AGGCGCTGGG CATAAAAGTC
GTGGCGCTGG AGCCAAAAAC CCATGCCGAT GTGCGGCGCG TGCTTCGCAA GCTCGGCGCG
CTGCTGGAGG TTCCCGACGA CACCGGTGCC GATCGCCTGT GGCGCGTCAT CGACAGCAGT
GTCTCGGCCG CCGCGCAATC GCTCTCGCCC AAAGCCAGGG ACAGCCGGGT CTACTTTGAG
GTGAGCCGGG GGCCCTATGC CGCCGGCGAG TCCTCCTTCA TTGGCGAAAC GCTGACCCGG
CTGGGCGTGA AGAATGTGGT GCCGGCGTCG CTCGGCCCCT TCCCCAAGCT GAATCCCGAA
TTTGTGGTGC GCGCCAATCC CGACGTGATC ATGATCGGCA ACCGCAGCAT GCAGGCCATG
GAGCCTTACC CCGGCTGGGG CAGTATCAAG GCGGTCAGGG AGCGGCGTAT TTGTGTCTTC
GGTGTGGACG AATCCGACGT GGTGGTGCGT CCCGGCCCGC GCATGGCCGA GGCGGCGCGC
ATCATGGCCA AGTGCCTTGA AGGCAAGCAG CGGTGA
|
|---|
| Protein sequence | MKRIAGWLVL LCLVLAAPVR ALPLQLTDDR GVTLTFAQSP QHIVSMLPSL TESVCALDQC
HRLIGVDRYS NYPASVKRLP VLGGGIDPNI EGIVALKPDV VLVATSSRAT GRLEALGIKV
VALEPKTHAD VRRVLRKLGA LLEVPDDTGA DRLWRVIDSS VSAAAQSLSP KARDSRVYFE
VSRGPYAAGE SSFIGETLTR LGVKNVVPAS LGPFPKLNPE FVVRANPDVI MIGNRSMQAM
EPYPGWGSIK AVRERRICVF GVDESDVVVR PGPRMAEAAR IMAKCLEGKQ R
|
|---|
| |