Gene Bpro_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2725 
Symbol 
ID4014607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2872111 
End bp2872878 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID637942389 
Productextracellular solute-binding protein 
Protein accessionYP_549539 
Protein GI91788587 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.377172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCT TGCAAAAAAT AGCGGCTACG GCCGGACTGT TCACACTCGC GCTGGGCGGC 
GTCCATGCCC AGAACACCGA GCTGGTGGTC GGCTCCAGCG CCACCTACCG GCCGTTTGCC
TATGAAAGCC CGAGCAAGGA CATCGTCGGC TACGACGTGG ACATGATCAA GGCCATCGCC
CAGAAGGCTG GCCTGAAGAT CAAGATCGTC AACACGCCCT GGACCGGCAT CTTCGCCGCC
CTCAACAACG GCGACCTGGA CCTGGTGATC TCCGGCGTGA CCATCAACGA CAAGCGCAAG
CAGTCCTACG ACTTCAGCAC CCCCTACTTC GAGGCGCGCC AGCTGCTCGC CGTGCACAGC
AACAGCACCG CCAAAGGCCT GAAGGACCTG GCCGGCAAAA AGATCGGTGT GGTCACCGGC
AGCACTGGCG ACGACATGGC CTCGCGCGAG TTCGGCAAGA CCAACCCCGA CATCCGCCGC
TTCGAGAGCA CGCCCGTGGT GATCTCCGAG CTGGCCAACA ACGGCCTGGA TGCGGCCATC
GGCGACAACG GCGTCATTGC CTTCCGCGCC CAGGAGCACA AGCAGCTCAA GACCGTCAGC
GACCCGGCCT TTCCCAAGGA GTACTTCGGC ATCGTCGTCA AGCAGGGCAA CAAGGCCTTG
CTGGACAAGC TCAACGCCGG CCTGGCCGCG GTGAAAGCCG ACGGAAGCTA CGCGCAGATC
TACAAGAAGT GGTTCCAGGC TGAAGCCCCC GTGCTACCGG CCCAATAA
 
Protein sequence
MNLLQKIAAT AGLFTLALGG VHAQNTELVV GSSATYRPFA YESPSKDIVG YDVDMIKAIA 
QKAGLKIKIV NTPWTGIFAA LNNGDLDLVI SGVTINDKRK QSYDFSTPYF EARQLLAVHS
NSTAKGLKDL AGKKIGVVTG STGDDMASRE FGKTNPDIRR FESTPVVISE LANNGLDAAI
GDNGVIAFRA QEHKQLKTVS DPAFPKEYFG IVVKQGNKAL LDKLNAGLAA VKADGSYAQI
YKKWFQAEAP VLPAQ