| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2701 |
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| Symbol | rimO |
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| ID | 4014620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2845012 |
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| End bp | 2846421 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637942364 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_549515 |
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| Protein GI | 91788563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0312438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.2083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG TACTTTCCCC GATGACAGCA ATCTCCACCA AACCGGCCCC CCGTGTCGGG
TTTGTCAGCC TGGGCTGCCC CAAGGCGCTG ACCGATTCCG AGTTGATACT CACACAATTG
AGTGCTGAGG GCTATCAGAC GTCCAAGACC TTTGAGGGCG CAGACCTGGT GATCGTCAAC
ACCTGCGGCT TCATTGACGA CGCGGTCAAG GAAAGCCTGG ACACCATCGG CGAGGCGCTG
GCAGAAAACG GCAGGGTCAT CGTGACCGGC TGCCTGGGGG CCAAGGGCGG CGAGGGTGCT
GGCAACCTGG TGCGCCAGAT GCACCCCAGC GTGCTGGCTG TGACCGGCCC GCACGCCACG
CAAGAGGTCA TGGATGCGGT GCACCTGAAC TTGCCCAAGC CGCATGACCC GTTTGTGGAC
CTGGTGCCCA ATGCGTTTGG CATTGCGGGC ATCAAGCTCA CACCGAAGCA CTATGCCTAT
CTGAAGATCA GCGAAGGCTG CAACCATCGC TGCACCTTTT GCATCATCCC TTCCATGCGT
GGCGACCTGG TGTCCCGGCC CATCGGCGAT GTGCTGAACG AAGCACGCGC GTTGTTTGAA
GGGGGCGTGA AAGAACTGCT GGTGATCAGC CAGGACACCT CCGCCTATGG CGTGGATGTG
AAGTACCGCA CCGGTTTCTG GGATGGCAAG CCGGTCAAGA CCCGCATGCT GGAACTGGTC
CAGGCGCTGG GCGATATTGC CGAGCCCTAT GGTGCCTGGG TTCGCCTGCA CTATGTGTAC
CCTTACCCCA GCGTCGACGA GGTGCTCCCG CTGATGGCCA CCGGCAAGGT CCTGCCTTAC
CTGGATGTGC CTTTGCAGCA CAGTCACCCT GATGTTTTGA AGCGCATGAA ACGCCCAGCC
AGCGGCGAGA AAAATCTTGA GCGCATTGCA CGCTGGCGCG AGATCTGTCC CGAAATTGTG
ATTCGCAGTA CCTTTATTGC CGGCTTTCCG GGGGAAACCG AAGCTGAATT CGCGCACTTG
CTGGAGTTCA TGCGCGAGGC CCGCATCGAC CGTGCAGGCT GTTTTGCCTA CAGTGCGGTG
GAGGGCGCTA CCGCCAATGA CATTCCCGGC ATGCTGCCGC TGGAGGTGCG TGAAGAGCGG
CGGGCGCGCT TCATGGCCGT GGCTGAGGAG GTTTCAAGCC TGAAGCTGCA GCAGCGCGTC
GGCGCCACGA TGCAGGTGCT CGTCGATTCA GCGCCGGCCT TGGGCCGCAA GGGCGGCACG
GGCCGCTCGT ATGCGGACGC GCCCGAGATT GATGGCGTGG TCAAACTGCT GCCGCCCGAG
AAAATCAGCA AGACACTCAA GGTGGGTGAG TTCACCCGGG CCCGTATTGT CGGAACCCAG
GGCCACGACC TGGTGGCCAT ACCGGTCTGA
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| Protein sequence | MSEVLSPMTA ISTKPAPRVG FVSLGCPKAL TDSELILTQL SAEGYQTSKT FEGADLVIVN
TCGFIDDAVK ESLDTIGEAL AENGRVIVTG CLGAKGGEGA GNLVRQMHPS VLAVTGPHAT
QEVMDAVHLN LPKPHDPFVD LVPNAFGIAG IKLTPKHYAY LKISEGCNHR CTFCIIPSMR
GDLVSRPIGD VLNEARALFE GGVKELLVIS QDTSAYGVDV KYRTGFWDGK PVKTRMLELV
QALGDIAEPY GAWVRLHYVY PYPSVDEVLP LMATGKVLPY LDVPLQHSHP DVLKRMKRPA
SGEKNLERIA RWREICPEIV IRSTFIAGFP GETEAEFAHL LEFMREARID RAGCFAYSAV
EGATANDIPG MLPLEVREER RARFMAVAEE VSSLKLQQRV GATMQVLVDS APALGRKGGT
GRSYADAPEI DGVVKLLPPE KISKTLKVGE FTRARIVGTQ GHDLVAIPV
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