| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2686 |
|---|
| Symbol | |
|---|
| ID | 4014641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2826532 |
|---|
| End bp | 2827038 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637942348 |
|---|
| Product | outer membrane chaperone Skp (OmpH) |
|---|
| Protein accession | YP_549500 |
|---|
| Protein GI | 91788548 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2825] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.327298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATT TTTCAACCAA AATTTTCCTG GGCTGCGTCA TCGCATTGGC GGGTTTTTCC
GCCAGTGCGC AGGAGTTCAA GGTTGGGGTT GTCAACCTGG ACAGGATTTT CCGTGAAGCC
AATTCCGCCA AGGCCGCCCA GACCAAACTG GAGCAGGAAT TCAGCAAGCG CGAGAAAGAA
CTGAACGACA GCGCCACGCA GCTGAAAACC CTGTCAGACA AATTTGAACG CGAGGCGCCC
ACGCTGGCCG AGAGCCAGCG CAACACCCGG CAAAAGCAGC TGGTCGACCA GGACCGGGAT
TTCCAGCGCA AGCGCCGCGA GTTCCAGGAG GACCTGAATG CCCGCAAGAA CGAAGAACTT
CAGCAGGTGA TCGAGCGCGC CAACAAGGTG GTCAAAACAC TGGCTGAAAC CGAAAAGTAC
GACCTGATCC TTCAGGAGTC GGTCTACGTC AATCCCAAGC ATGACATCAC CGACAAGGTG
ATCAAGGCGC TGAACGCCTC CCGTTAA
|
|---|
| Protein sequence | MKHFSTKIFL GCVIALAGFS ASAQEFKVGV VNLDRIFREA NSAKAAQTKL EQEFSKREKE
LNDSATQLKT LSDKFEREAP TLAESQRNTR QKQLVDQDRD FQRKRREFQE DLNARKNEEL
QQVIERANKV VKTLAETEKY DLILQESVYV NPKHDITDKV IKALNASR
|
|---|
| |