| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2556 |
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| Symbol | |
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| ID | 4014783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2677361 |
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| End bp | 2678338 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637942218 |
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| Product | type II secretion system protein |
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| Protein accession | YP_549370 |
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| Protein GI | 91788418 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.460971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.349812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATC TCTACTACCT TTTTGCCACG CTGATTTTCA TTGCGGTGGT CCTTCTGGTT
GAGGGCCTGT ACCTCAGCTG GAACTCTACC AAGGGGCCTG AAGCCGAGCG TGTGGCGCGT
CGCCTGCGCG TCATGTCGGC GGGCGGACAC GGTGATGCGC AAAGTATTTC CATTACCAAG
GAACGACTGC TGAGCGAAAC GCCAGTCATG CAGCGCATTT TGCTGGGGGT TCCGCGCGTT
GGCACGCTGG ACCGCCTGCT CCAGCAGTCA GGGCTGTCCT GGAGTGTGGG CGAATTCCTC
GGAATGGCAT TGATTGCCTT CCTGGTTGTT TTCTTTGCAG GCAGTTACCT TGCCGTGCCC
TTGCTGCTGC GGCTGGCGCT GGCGGGCGCT GCTGCCCTGC TCCCATTTCT TTATGTCACG
AGAGCCAAGC GCAAGCGTCT GGATCGCATC GAGCACCAAC TGCCTGATGC GCTGGACTTG
ATGGGCCGCG CCTTGCGCGC CGGCCACGCC TTTCCGACGG CGCTGAAGAT GGTGGGCGAC
GAGATGAACG ACCCCTTGGC CGGAGAATTT CGCATCGCTT TTGACGAGGT GAACTTTGGC
ATTGCCATGC CGGATGCCCT GATGAACATG GCCACGCGGG TACCCAGCAC CGATCTGCGC
TACTTTGTGA TTGCCGTGCT GATCCAGCGG GAAACGGGCG GCAATCTTTC AGAATTGTTA
ACGAGTATCA GCGCCATCAT CCGGGACCGG ATCAAGCTGA TGGGGCAGGT ACGGGTGCTG
TCTGCCGAGG GCAAGATGTC AGCCTGGGTG CTGTCTCTGC TGCCGTTCGG AGCGGCATTC
ATGATCCAGC TGACGAACCC CAAGTTTCTT GAGGTGCTGT ATACCGACCC CGCAGGCCGC
AAGATGCTCG CCGCCGCCAT CGTCATGATG GCGCTCGGCA TCCTGGTCAT GCGCAAGATC
ATTCGAATCC GGGTGTGA
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| Protein sequence | MDYLYYLFAT LIFIAVVLLV EGLYLSWNST KGPEAERVAR RLRVMSAGGH GDAQSISITK
ERLLSETPVM QRILLGVPRV GTLDRLLQQS GLSWSVGEFL GMALIAFLVV FFAGSYLAVP
LLLRLALAGA AALLPFLYVT RAKRKRLDRI EHQLPDALDL MGRALRAGHA FPTALKMVGD
EMNDPLAGEF RIAFDEVNFG IAMPDALMNM ATRVPSTDLR YFVIAVLIQR ETGGNLSELL
TSISAIIRDR IKLMGQVRVL SAEGKMSAWV LSLLPFGAAF MIQLTNPKFL EVLYTDPAGR
KMLAAAIVMM ALGILVMRKI IRIRV
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