| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2549 |
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| Symbol | |
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| ID | 4014776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2670136 |
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| End bp | 2671680 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637942211 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_549363 |
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| Protein GI | 91788411 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.124732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.115348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT ATTCCACCGG GGCAAGACCG ACTTTGTTGG GCGTGGCGCT TGCTGTAGCA
GGCGTGATGG CTGCGTCAAC GCTGGCGCAT GGGCAGGTCG CTATCGAGGC AGGCAATCTC
GCAGCGAAAA ATCCACCGAC AGCCACTTCC GGGCCAGGTA AACAAGCCGC AACCGCCCAG
CCCAAGGCCG TGGTCACTCA AGCGCGAGCC CCGATCACCG GCAAGGTCGA ATTGGCACCC
CAAATCAACC TATCGGAGGG AAAATCCACC CTGATGCGCC TGCCCTCCCC GGCAACACGG
CTTTCCGTGG GTGACGCGCG AATCGTCGAT GTGATTCTGC TCAACCCCAG CGAGCTGTAC
ATGCTCGGCA AATCTGTTGG CTCCACCAAC CTCATCCTCT GGAACAAGGC CAACGACGCG
ACCATCATCG ACATTGCGGT CGGCATGGAC ACCGTGGCGC TGCGCTCGCG GCTCGAGCAG
ATGTTCGCCA GCGAAAAAGA TCTCAAGATC ACAACGGCCG CCGACACCCT GATCCTCTCC
GGCATGGTTT CCGATGTGGT CAAGGCTGAT CAGATCCTTT CGGTCGCCAA TGCCTACGTG
CAGCGCAGCT CGCGCAGTGG GCAGGCTGGC GGCGCATCGG GCGGCTCGGC GGGTGGCCAG
CAGTCCGACA GTGCCAAGGT CGTCAACATG CTCTCCATCG CTGCGCCGCA GCAGGTCATG
CTGGAAGTGC AAGTTGCCGA GGTCTCCAAG ACGCTGGCAG ACCAATTGGG AGCCAGCATC
GGCGGCCGCA AAACAACCGG AAGCTGGACC TACACCTTGC TGTCCAACCT GCTCACCGGC
GCCGCCAGCA GTATCGGAGC TGTCAAGAAC AGCGGGAATT TTTTGACCAT TGATGCACAA
AAAGGCGATG GCCTGCTCAA GATATTGGCT GAACCCACGA TCATGGCCAT CAGCGGACAG
GAAGCCAGCT TTCTGGCTGG CGGGAAAATC TTCATACCCG TCAAGTCAGG AAACAACGGT
GAAATCGCGC TGGAAGAGAA AGAATTCGGC GTTTCGGTGA AGTTCCTGCC CACCGTCCTG
GAAGGCGGCC GGATCAACCT CAAAGTCGCG CCCGAAGTGT CGGATTTGAA CCGCCAGGGC
GTAGGCATTT CGGCCACCGG TTCGAGCACC ACGGCAATTT TGCCTTCATT CACCACACGC
CGCGCAAGCA CCACCGTTCA GCTTTTTGAC GGCCAGAGCT TCGCCATCGG CGGCCTGATC
AAGAACAACG TCACAGCCAA CATCAACGCC TTCCCGCTGC TCGGCGAAGT ACCCGTGCTT
GGTGCGCTGT TTCGCAGCAG CGACTTCCAG ACCGACAGGT CAGAACTGGT GTTTATTGTG
ACCCCGCACC TGGTCAAGCC GCTGCCGGCA GATTACAAAC TGCCGACCGA CCCCTACATC
CAGCCCAGCC GCTCCGAGTT CTTCCTCGGC GGAAAAATGG AAGGTGCCGC TCCGCCAGAA
GGCAATAAGC CGGCTGGTCC CGCAACCGGC TTTGAAGTGA AATAA
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| Protein sequence | MKTYSTGARP TLLGVALAVA GVMAASTLAH GQVAIEAGNL AAKNPPTATS GPGKQAATAQ
PKAVVTQARA PITGKVELAP QINLSEGKST LMRLPSPATR LSVGDARIVD VILLNPSELY
MLGKSVGSTN LILWNKANDA TIIDIAVGMD TVALRSRLEQ MFASEKDLKI TTAADTLILS
GMVSDVVKAD QILSVANAYV QRSSRSGQAG GASGGSAGGQ QSDSAKVVNM LSIAAPQQVM
LEVQVAEVSK TLADQLGASI GGRKTTGSWT YTLLSNLLTG AASSIGAVKN SGNFLTIDAQ
KGDGLLKILA EPTIMAISGQ EASFLAGGKI FIPVKSGNNG EIALEEKEFG VSVKFLPTVL
EGGRINLKVA PEVSDLNRQG VGISATGSST TAILPSFTTR RASTTVQLFD GQSFAIGGLI
KNNVTANINA FPLLGEVPVL GALFRSSDFQ TDRSELVFIV TPHLVKPLPA DYKLPTDPYI
QPSRSEFFLG GKMEGAAPPE GNKPAGPATG FEVK
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