| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2535 |
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| Symbol | |
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| ID | 4014801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2652340 |
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| End bp | 2654637 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637942197 |
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| Product | putative spermidine synthase |
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| Protein accession | YP_549349 |
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| Protein GI | 91788397 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00118236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACCGTC CCGCAGTCGC GTTGTCCGGC GATCCGCCGC ACCGTGAAGC AGCGCCGGGC
CAGCAAGTTC GCGTACTGTG CGTGCTCTTT TTTTTCTCGG GTTTCCCGGC GCTGATCTAC
CAGTTGGTCT GGCAGCGCGC CTTGTTCCGC ATCCTCGGCG TCAACATTGA ATCGGTGACG
ATTGTAGTGA CCGCATTCAT GCTCGGCCTG GGCCTCGGCG GGCTGGCGGG CGGCTGGCTG
TCGAAGCGCC AGGGCCTTCC GCTCCTGCTG CTGCTTGCTG CCATCGAGAC GCTCACTGGC
GCGTTCGGGC TGTTCTCACT GTCCATTTTC GAGCGTGTCG GCGACCTGGT CCTTGGTGCA
CCATTGCCGC TGACGGCGCT GGTAACGTTG TCCCTGGTGG TGGTGCCGAC GCTGCTGATG
GGCGCGACGC TGCCGCTGCT GGTGGGTCAC CTGGTGCGGC GCTCCGGCAA CGTCGGAAGT
GCGGTTGGGC AACTCTACTA TGTCAACACC CTGGGCGCAG GTGCTGCCTG CCTGGTGTGT
GCGGTGCTGC TGTTCCCGTT GCTTGGCATG CAAAGCTCGG TACTGATTGC CGTGGCCTTC
AACGCAGCGG TTGCGTTGGG GGCTGTCTCG GCGCATGAGG TTGATCGTCG CCGTGTACGT
CGCGCGGTCG CGCAACCCGA GCCGTCGCCA GCAACTCTAG CACCTCGCAC CAGCCTGCCG
TTCGGGGTTG TGCTGGCGAT GGCGGGCGCT GGGGGCCTTG TTTCGCTGTC GTACGAGATT
TTCTTTTTTC GCGCTATGTC CTACGCCAGC GGAAGCAGTT CGTTCGCGTT CGCGACGACG
CTGGGGGCCT TTCTGATCGG TCTGGCTTCC GGTGCCCGGC TGGGTGGCGA AGCCTGCGCG
GGGCCGGGCG GCGAGGTGTT GATGCGCCGA ATGCTGCGCG GCTTGCTCAT CGCCAGCCTG
GTGGGGTTCG CGTTCCTGCC CGTACTCACG CACCTGGCGT GGCTGAATGG CGGGATTCTC
GGCGTGGGCC TGCTGCTCGT GTACCTGCTG GCGCGCCAAT GGGGTCTGGT GTTGCCATGC
CTGGCGCACC TCGGCGTTGC CGCCGACGCG CAGGCCGGCA TGCGAACCGG GCTGCTGTAC
CTTGCAAACA TCCTTGGTGC CGCGTCGGGT TCGGTGCTGA CGGGCTTTGT GCTGATGGAC
CACCTGAGCT TGGTGGAAGT CGGTCAGTTG CTCGTCGTTG CGGGGCTGGG GTGCGCGCTT
ATCCTGGGCC TGGCGATCCC GACGTCGCGC CGCGCCAACC TCGGACGTGC GGGCTCTATT
GCGCTGGCCG GTGGGCTGGC CGTGCTGACC CTGCCTTGGG CCAGCGACAA AGTGCTGGAG
GCGCTTCAAT GGAAAGGCGG ACCCGAGGCC AAGGTCGCCT TCGCACAAGT CGTGGAAAAC
CGCAGCGGTA TCGTCACGGT CGATCGCTCG GGCACTGTCT ATGGCAATGG GGCGTACGAC
GGTCACTTCA ACGTCGATTT GATCCGGGAT GTGAACGGCA TCGTGCGCCC GTATGCGCTC
AGCCTGTTCC ATGCGGCGCC GCGCGAGGTG CTGATGATCG GGCTCGCGTC CGGCTCATGG
GCTCAGGTTC TGGCCAACAA CCCCGAGGTG ACTTTGCTCA CGATCGTCGA GATCAATCCA
GGCTATGTGG GCCTCATAGC CGGCAACACC AGCGTCGCTT CGGTGCTGAC CCATCCCAAG
GTACGGCTGG TAACGGATGA CGGCCGCCGC TGGTTGAGGA TGAATGCACA TCGGCGCTTC
GACGCGATCG TTATAAACAC CACATTTCAC TTCCGCGCCA ACGCGACGAA CTTGCTGTCG
GCCGACTTCC ACGCGATCCT GAAGGAGCAT CTGAACCCGA GGGGCGTCGT GTTCTACAAC
ACCACCAACT CCAGCCGGGT TCAGCGCACA GGCTGTATGA GTTTCAATCA CGGAGCGCGG
TTTACCAACC ACCTGCTGCT GTCGTCTACA CCTATAGACT GGGACTTCAT ACGGTGGCGG
CGCACGCTTG AAGCCTACCG CATCGATGGC CGGCCCATGC TCGACCTCTC ACGCCCCGAG
CACGCCCAGG GCCTGGAGCG GCTGATGGCG CTCGAAGGCC AAACGCAGCC AGATGCGGTG
CACGCCCGGA GCGTGCCGGA CGCCCCGGGC GACTGGATTG AGCCCTGCGC GCAGGTGTTG
GCACGCACCG CCGGCCAGAC CCTCGTGACG GACGACAACA TGGGCACCGA GTGGCGTTAT
TTTTGGGATA AGCAATGA
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| Protein sequence | MNRPAVALSG DPPHREAAPG QQVRVLCVLF FFSGFPALIY QLVWQRALFR ILGVNIESVT
IVVTAFMLGL GLGGLAGGWL SKRQGLPLLL LLAAIETLTG AFGLFSLSIF ERVGDLVLGA
PLPLTALVTL SLVVVPTLLM GATLPLLVGH LVRRSGNVGS AVGQLYYVNT LGAGAACLVC
AVLLFPLLGM QSSVLIAVAF NAAVALGAVS AHEVDRRRVR RAVAQPEPSP ATLAPRTSLP
FGVVLAMAGA GGLVSLSYEI FFFRAMSYAS GSSSFAFATT LGAFLIGLAS GARLGGEACA
GPGGEVLMRR MLRGLLIASL VGFAFLPVLT HLAWLNGGIL GVGLLLVYLL ARQWGLVLPC
LAHLGVAADA QAGMRTGLLY LANILGAASG SVLTGFVLMD HLSLVEVGQL LVVAGLGCAL
ILGLAIPTSR RANLGRAGSI ALAGGLAVLT LPWASDKVLE ALQWKGGPEA KVAFAQVVEN
RSGIVTVDRS GTVYGNGAYD GHFNVDLIRD VNGIVRPYAL SLFHAAPREV LMIGLASGSW
AQVLANNPEV TLLTIVEINP GYVGLIAGNT SVASVLTHPK VRLVTDDGRR WLRMNAHRRF
DAIVINTTFH FRANATNLLS ADFHAILKEH LNPRGVVFYN TTNSSRVQRT GCMSFNHGAR
FTNHLLLSST PIDWDFIRWR RTLEAYRIDG RPMLDLSRPE HAQGLERLMA LEGQTQPDAV
HARSVPDAPG DWIEPCAQVL ARTAGQTLVT DDNMGTEWRY FWDKQ
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