Gene Bpro_2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2520 
Symbol 
ID4014825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2634169 
End bp2635146 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content64% 
IMG OID637942183 
Productaminodeoxychorismate lyase 
Protein accessionYP_549335 
Protein GI91788383 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0480566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.003327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGTATTTG CCGGCGCCCT GCTGTTGTTT GGTGCGGCTT TGTGGTGGCT GCATGAACCG 
ATTCCGTTGC GGCTTGTCCC CGGCACCCAG GTGCTGGACC TCGAAATCGA GCCGGGCACA
CCCGCCAGTG GTGTTGCGCA GGTGGTAGTG GACAGCGGCG CCCAGGTGCC TGTGGTGCTG
CTGCATGCGT GGTTCCGTTT CTCGGGGCAG GCCCGGCAGA TCAAGGCCGG CAGCTATGAG
CTGGTGCCGG GTACCACACC TCGCCGATTG CTGAGCATGC TGGTGCGCGG CGAGGAAACG
CTCAAAAGCG TCACGCTGGT TGAGGGCTGG ACTTTCGCCC AGGTTCGTAC AGCGCTGCAA
AAAGCAGAGA ATCTGGCGCC CGATACGCTC GGGGTTGGCC CGGAAGCCAT CATGGAACAG
CTGGGCCGGC CGGGCCTGCA CCCGGAAGGC CGGTTTTTTC CGGACACCTA TACCTACGCC
AAGGGGGCCA GCGACCTGTC CGTGCTCAAG CGCGCCGCCC GCGCGATGGA CAAGCGGCTG
GAAGCCGCCT GGGCTCAACG CAACGCGGAC ACACCACTCA AAACACCGGC GGAGGCCCTG
ATCCTGGCAA GCATTGTGGA GAAAGAAACC GGGAAACCTT CGGATCGTCC CCAGATCGGC
GGCGTCTTCA CCAATCGCCT GCGCCTGGGC ATGATGCTGC AGACCGATCC CACCGTGATT
TATGGCCTGG GCCCGCAATT TGACGGCAAC CTGCGCAAGC GCGACCTGCT GACGGATGGC
CCTTACAACA CCTATACCCG GGCTGGCTTG CCTCCCACGC CCATCGCCAT GCCTGGCAAA
GCCGCCTTGC TGGCCGCAGT GCACCCGGCG GCGACCCCGG CGATTTATTT TGTTGCCCGG
GGCGACGGCA GCAGCCATTT CAGCGCCAGC CTGGACGAGC ACAACCGTGC CGTCAATAAA
TATATCCGGG GTCAATAA
 
Protein sequence
MVFAGALLLF GAALWWLHEP IPLRLVPGTQ VLDLEIEPGT PASGVAQVVV DSGAQVPVVL 
LHAWFRFSGQ ARQIKAGSYE LVPGTTPRRL LSMLVRGEET LKSVTLVEGW TFAQVRTALQ
KAENLAPDTL GVGPEAIMEQ LGRPGLHPEG RFFPDTYTYA KGASDLSVLK RAARAMDKRL
EAAWAQRNAD TPLKTPAEAL ILASIVEKET GKPSDRPQIG GVFTNRLRLG MMLQTDPTVI
YGLGPQFDGN LRKRDLLTDG PYNTYTRAGL PPTPIAMPGK AALLAAVHPA ATPAIYFVAR
GDGSSHFSAS LDEHNRAVNK YIRGQ