Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2520 |
Symbol | |
ID | 4014825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2634169 |
End bp | 2635146 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637942183 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_549335 |
Protein GI | 91788383 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0480566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.003327 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGTATTTG CCGGCGCCCT GCTGTTGTTT GGTGCGGCTT TGTGGTGGCT GCATGAACCG ATTCCGTTGC GGCTTGTCCC CGGCACCCAG GTGCTGGACC TCGAAATCGA GCCGGGCACA CCCGCCAGTG GTGTTGCGCA GGTGGTAGTG GACAGCGGCG CCCAGGTGCC TGTGGTGCTG CTGCATGCGT GGTTCCGTTT CTCGGGGCAG GCCCGGCAGA TCAAGGCCGG CAGCTATGAG CTGGTGCCGG GTACCACACC TCGCCGATTG CTGAGCATGC TGGTGCGCGG CGAGGAAACG CTCAAAAGCG TCACGCTGGT TGAGGGCTGG ACTTTCGCCC AGGTTCGTAC AGCGCTGCAA AAAGCAGAGA ATCTGGCGCC CGATACGCTC GGGGTTGGCC CGGAAGCCAT CATGGAACAG CTGGGCCGGC CGGGCCTGCA CCCGGAAGGC CGGTTTTTTC CGGACACCTA TACCTACGCC AAGGGGGCCA GCGACCTGTC CGTGCTCAAG CGCGCCGCCC GCGCGATGGA CAAGCGGCTG GAAGCCGCCT GGGCTCAACG CAACGCGGAC ACACCACTCA AAACACCGGC GGAGGCCCTG ATCCTGGCAA GCATTGTGGA GAAAGAAACC GGGAAACCTT CGGATCGTCC CCAGATCGGC GGCGTCTTCA CCAATCGCCT GCGCCTGGGC ATGATGCTGC AGACCGATCC CACCGTGATT TATGGCCTGG GCCCGCAATT TGACGGCAAC CTGCGCAAGC GCGACCTGCT GACGGATGGC CCTTACAACA CCTATACCCG GGCTGGCTTG CCTCCCACGC CCATCGCCAT GCCTGGCAAA GCCGCCTTGC TGGCCGCAGT GCACCCGGCG GCGACCCCGG CGATTTATTT TGTTGCCCGG GGCGACGGCA GCAGCCATTT CAGCGCCAGC CTGGACGAGC ACAACCGTGC CGTCAATAAA TATATCCGGG GTCAATAA
|
Protein sequence | MVFAGALLLF GAALWWLHEP IPLRLVPGTQ VLDLEIEPGT PASGVAQVVV DSGAQVPVVL LHAWFRFSGQ ARQIKAGSYE LVPGTTPRRL LSMLVRGEET LKSVTLVEGW TFAQVRTALQ KAENLAPDTL GVGPEAIMEQ LGRPGLHPEG RFFPDTYTYA KGASDLSVLK RAARAMDKRL EAAWAQRNAD TPLKTPAEAL ILASIVEKET GKPSDRPQIG GVFTNRLRLG MMLQTDPTVI YGLGPQFDGN LRKRDLLTDG PYNTYTRAGL PPTPIAMPGK AALLAAVHPA ATPAIYFVAR GDGSSHFSAS LDEHNRAVNK YIRGQ
|
| |