| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2428 |
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| Symbol | truB |
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| ID | 4014927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2530305 |
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| End bp | 2531318 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637942093 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_549245 |
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| Protein GI | 91788293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.36134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA CCTCTACTCA TCGCCAGAAG ATTCAGCGAC GTCCCGTGCA CGGCGTGCTG
CTGCTCGACA AGCCGCTGGG CCTGTCGAGC AACCAGGCGC TGCAAAAAGC CAAATGGCTG
TTGCGCGCCG ACAAGGCCGG GCATACCGGT ACGCTGGATC CGCTGGCCAC TGGCGTGCTG
CCGCTGTGCT TTGGGGCGGC GACCAAATTC AGCCAGATCC AGTTGGACGC CGACAAGACG
TATGAAGCCG TGCTCCTGCT GGGCCGGAAA ACCACGACGG CTGATGCCGA GGGCGACGTC
ATCGAGACGC GCCCCGTTCC CGAGATCACC CCCGAACTGC TGGCAACCCT GACCCGGCGT
TTTACCGGCC CGCTGGCGCA GATTCCGCCC ATGTATTCCG CGCTCAAGAA AGACGGCAAG
GCACTGTACG AATACGCGCG CAAAGGCGAA GACGTGGAGC GGGAAGCGCG CCACATCACG
ATTTACAAGC TGGATATGGC TCTGACCCAT GACGAGCGGG CGCCGGCAGC TATCAAAATC
ACCGTGACCT GCAGCAAGGG CACCTACATT CGCACGCTTG GTGAAGACAT CGGCGAGGCG
ATCGGTTGCG GCGCTCACCT CGGGTCCCTG AGGCGGCTGG AGACCGGCGG CTATGTCGCT
TCGCAGTGCG TGGGCCTGCC GGCGCTGGAA GCCATGAGCG AGCAGCAGCG CGAAGCCTGC
CTGCTGCCAG TTCAATCACT CGTCGCCAAC TATCCGGTTG TCACACTCGA TGCCGATAAT
GCAGGGCGCT TTTTGAGCGG CCTGCGCCGT CGCGGCAGCC CCGGCCAATG GGGTCCGGAC
GCGGTGCTGG TGCAGGTGTA CGGTAGCGAC CCGGCGGCTT TTCTCGGCTC GGCCCATGTC
ATGGCTGACG AGTTGATTCC GGGGCGCCTG CTCAGCCCGA TTGAAATCCA GGACATGCTG
GCCCCGCGTC CGCCTGTTAT TTCCAACCCT GCGGCAAGCG CCGCAACGGC TTAG
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| Protein sequence | MTQTSTHRQK IQRRPVHGVL LLDKPLGLSS NQALQKAKWL LRADKAGHTG TLDPLATGVL
PLCFGAATKF SQIQLDADKT YEAVLLLGRK TTTADAEGDV IETRPVPEIT PELLATLTRR
FTGPLAQIPP MYSALKKDGK ALYEYARKGE DVEREARHIT IYKLDMALTH DERAPAAIKI
TVTCSKGTYI RTLGEDIGEA IGCGAHLGSL RRLETGGYVA SQCVGLPALE AMSEQQREAC
LLPVQSLVAN YPVVTLDADN AGRFLSGLRR RGSPGQWGPD AVLVQVYGSD PAAFLGSAHV
MADELIPGRL LSPIEIQDML APRPPVISNP AASAATA
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