| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2329 |
|---|
| Symbol | |
|---|
| ID | 4015020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2425378 |
|---|
| End bp | 2427783 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637941997 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_549150 |
|---|
| Protein GI | 91788198 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.212398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCCTTGCCTG CGTCCAACCT TTCGCCACCG AAGCTCTTCA CCACCTGCGC
CACCCTACCC GGCGCGCAGT GGCCTTGTCG TTGGCTGCAC TGCCGGTGCT GTTGCTGCTG
TATGCGCTGA TCCTGATTCC TTTCACCCCG AGCATCAAAG ACGTCAGGAA AGCCAAATCG
CAGCAGCCTG CGGTGGTTAT GTCCGTCGAC GGCAAGGAAC TGGCCCTGTT CAAGCGCGCC
AATCGCGACT GGGTCAAGCT CGCCGACATT TCACCCAACG TAGTTGCGGC ACTGATTGCA
ACCGAGGACC ACCGTTTTTA TGAGCACCAC GGGGTGGACC TCAGGCGAAC GGCTTCCTCG
GTTTTTCATA CATTTACCGG CGATCTGCAG GGCGGCTCGA CCATCACGCA GCAGCTCGCG
CGTAACCTGT ACCCCGAGGA GGTGGGCCGC GCGCGGAGTT TGACGCGCAA GTTCAAGGAA
ATCATCACGG CACTAAAAAT CGAGGCTGTG TACACCAAGC AGGAGATCCT GGAGACCTAC
CTGAACACGG TGCCATTCCT TTACAACGCC TACGGCATTG AAATGGCTGC GCGCACCTAC
TTCGACAAGT CGGCTGAAGC GCTGGATGTA CTGGAAAGCG CCACGCTGAT CGGCATGTTG
AAGGGCACCA GCTACTACAA CCCGGTGTTG AACCCGGAAC GTGCCGTGCA GCGACGCAAC
ATCGTTCTTG GCCAGATGAC CAAACACCAG AAGCTGGACG AAAAAAAGCT GGAGGGGCTG
AAGAAAAGGC CGCTGAAGAT CGATTTCGAG CGGCAGACCG AGCCGGTGGG CATGGCGCCC
CATGTTGCCC AGCACCTGCG CAAATGGCTG ATCGAATGGG CCGATCGCAA CGACTACAAC
ATTTACGCCG ATGGCCTGGT GGTACGCACC ACCATCGACT CGCGGCTGCA GAAGCTGGCC
AGCCAGGCCG TGGCACGCCA AGCCGACAGC CTGCAGGCCT CGGCCAACGC CGAGTGGGGG
CCTCGGGCAT GGGGTACCAA AAAAGAGCTG GTACGCGCCC TCGTGCGGGA CACGCGCGAC
TACAAAGCTG CACGTGAATC AGGCCAAAGC GACGAGCAGG CGCTCAAACA GGTGCAGGCC
GATGCGGCCA CGATGCGGGC ATTGCGCGAA GACAAGACCC GCCTGCAGGC CGGCCTTGTG
GCCATGGACC CCAGAAACGG GCATGTGATG GCCTGGGTCG GCAGCCGTGA CTTTGCACAG
GACCAGTTCG ACCATGTGCA ACAGGCGCGC AGGCAGCCCG GCTCCACCTT CAAGCCTTTT
GTTTACGCTG CGGCCTTCGA GCAGGGCGCG CTGGCGACCG ATGGTTTTGT GGATCAGGCG
GTGGAGATCC CGCTGGGCGG CGGCGCCGTC TGGCGGCCCA CCGACGCCGG TGCACCCAGC
GGATTGACGA TGACCCTGCG CGACGGGCTG GTGTATTCCA AGAACACCAT CACGGCCCAG
GTCATGCAGA CGGTAGGGCC CGCGAAGGTA GCCAAACTGG CCCATGCCAT GGGCGTACGC
CAAAGCAGGC TGGAGCAAGT GCCTTCGCTC GCATTGGGAA GCAGCCCTGT CACCTTGAAG
GAAATGGTCT CGGCCTACAG CACCATCGCC AACAACGGCA ACTACATTGA GCCGATTCTG
GTCACCGCTG TTGAAGACCG CCATGGGAAG GTGCTTGAAG CGTTTCAGGC CCAACCGCAG
GAGCAGGCCA TGTCGCTGGC CCATGCGCAA ACGCTGGTCG ATGTGATGCG TGGCGTCATT
GACAAGGGCA CAGGTGCCGC CATCCGGAGT CGATTCGGCA TTCAGGCCGA CGTGGCAGGC
AAGACAGGCA CGACCCAGGA CAACACCGAT GGCTGGTTCA TCCTGATGCA CCCGCAGCTG
GTGGCTGGGG CCTGGGTCGG CTTCAACGAT AACCGGGTGA CAATGGGCGA CTACTGGGGA
CCAGGCGCAC GCAGCGCACT ACCCATCGTC GGCGACTTCT TTGCGCTGTC GCTACGCAGC
CGGGTGATTG ACCAGCAGGC ACGATTTTCC GCGCCGCAAA CTGGTGGCAT GGCAAGTCAG
GTCAATGACT GGTTCAGCGG CCTGTTCCCC GCCAGCCCGG CGCCGCAACC AGCACCCGTC
CCCGACGCCG AGGTCATTTT GGCACCCGAA CCAGCCCCGC CGCCAACGCC GCCCACACCG
TCTCCACCCG CTGCGCCGTC AGTCCTTGTA TTGCCGAACG CGCCTTCGCA AGCAGGGCCG
CCGCCCGGCG CCACGGATCC GCGGTTCGTG TTCATCCCCT CCCGACCGGT CGCCCCGCCC
GATCGCGGCG GAGTCCCTAT CCTGCGTGAA TCCACGGTAC CGGAAAACGC CGGCACCGGG
CAGTAA
|
|---|
| Protein sequence | MKKLLACVQP FATEALHHLR HPTRRAVALS LAALPVLLLL YALILIPFTP SIKDVRKAKS
QQPAVVMSVD GKELALFKRA NRDWVKLADI SPNVVAALIA TEDHRFYEHH GVDLRRTASS
VFHTFTGDLQ GGSTITQQLA RNLYPEEVGR ARSLTRKFKE IITALKIEAV YTKQEILETY
LNTVPFLYNA YGIEMAARTY FDKSAEALDV LESATLIGML KGTSYYNPVL NPERAVQRRN
IVLGQMTKHQ KLDEKKLEGL KKRPLKIDFE RQTEPVGMAP HVAQHLRKWL IEWADRNDYN
IYADGLVVRT TIDSRLQKLA SQAVARQADS LQASANAEWG PRAWGTKKEL VRALVRDTRD
YKAARESGQS DEQALKQVQA DAATMRALRE DKTRLQAGLV AMDPRNGHVM AWVGSRDFAQ
DQFDHVQQAR RQPGSTFKPF VYAAAFEQGA LATDGFVDQA VEIPLGGGAV WRPTDAGAPS
GLTMTLRDGL VYSKNTITAQ VMQTVGPAKV AKLAHAMGVR QSRLEQVPSL ALGSSPVTLK
EMVSAYSTIA NNGNYIEPIL VTAVEDRHGK VLEAFQAQPQ EQAMSLAHAQ TLVDVMRGVI
DKGTGAAIRS RFGIQADVAG KTGTTQDNTD GWFILMHPQL VAGAWVGFND NRVTMGDYWG
PGARSALPIV GDFFALSLRS RVIDQQARFS APQTGGMASQ VNDWFSGLFP ASPAPQPAPV
PDAEVILAPE PAPPPTPPTP SPPAAPSVLV LPNAPSQAGP PPGATDPRFV FIPSRPVAPP
DRGGVPILRE STVPENAGTG Q
|
|---|
| |