Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2323 |
Symbol | |
ID | 4015013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2418460 |
End bp | 2419521 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637941990 |
Product | murein-DD-endopeptidase |
Protein accession | YP_549144 |
Protein GI | 91788192 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.488834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.516334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCATC AGATTTTCAA TCGCGCATTA AAAATCGTTG GATTCCTGGC TTTGTTTGCT GGACTTGCAA TGCCGGTGTC CAATGCGGCA ACTGACAAGA CCGAAATTGT AAAAAAGCAG CGCGCCGCGA AGATAACTGT TACCAAAAAA GCTGTCACAG CCCGCAAGAG TGCCCGGTTT ACAGCGGGCA CAAAAGGTAG AACCATTGTT CGTGCGGCTA TTCCCGCGAA ACCTTCTTTC GGTCAGATGG CTGGCCTGCA TGGGGCTCTG GATCCACTGG AGTTGAAGTC GAGCGTGGCG CTGGTCATTG ACCAGGATAC GCGTGAAGTG CTGTTCAGCA AAAATGACCA CGCCGTTTTG CCGATCGCGT CGCTCACCAA ATTGATGACC GGTGTCATCA TCAGCGGTGC CAAGCTGCCC ATGGACGAGA TGATCACGGT GACGCAGGAT GACGTCGACA CCGAAAAAGG CAGCAGTTCG CGACTCAGGG TTGGCACTAC GCTGACTCGT GGAGAGTTGT TGCATCTGGC CCTGATGTCG AGCGAAAATC GTGCGGCGCA TGCCTTGGGT CGCACCTACC CCGGCGGCAT GCCCACGTTC GTCAACCTGA TGAACGCCAA GGCAAAAATG CTGGGCATGA ATGACACCAG CTATGTCGAA CCAACGGGCC TTTCCAGCCG CAACCAGTCC AGTGCGCAAG ATTTGGCCAC ACTGGTCAAT GCCGCGCATG GAGATCCGGT GCTTCGCGAA TTGTCCACGT CCACTGGCTA TCAGGTGGCT GTTGGCAAGC GCACGCTGCA ATACAACAAC ACGAACCGCC TGGTGAAGAA TCCGGACTGG GATATCGGTC TGCAGAAAAC TGGCTACATC TCTGAAGCTG GTCAGTGCCT CGTGATGCAG ACCAAAATCG CCGGCCGCAA GCTCATCATG GTGTTTCTCG ATTCCGCCGG CAAGCTCAGC CGCCTGGGTG ATGCCGAGCG CGTGCGCCGT TGGGTAGAGT CAACCCCTTT GACCGACAAC AAGATAGACA TCAGCGCTTC AGCCAGCCAG ATTGGCGGTT GA
|
Protein sequence | MSHQIFNRAL KIVGFLALFA GLAMPVSNAA TDKTEIVKKQ RAAKITVTKK AVTARKSARF TAGTKGRTIV RAAIPAKPSF GQMAGLHGAL DPLELKSSVA LVIDQDTREV LFSKNDHAVL PIASLTKLMT GVIISGAKLP MDEMITVTQD DVDTEKGSSS RLRVGTTLTR GELLHLALMS SENRAAHALG RTYPGGMPTF VNLMNAKAKM LGMNDTSYVE PTGLSSRNQS SAQDLATLVN AAHGDPVLRE LSTSTGYQVA VGKRTLQYNN TNRLVKNPDW DIGLQKTGYI SEAGQCLVMQ TKIAGRKLIM VFLDSAGKLS RLGDAERVRR WVESTPLTDN KIDISASASQ IGG
|
| |