Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2294 |
Symbol | |
ID | 4015061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2386623 |
End bp | 2387603 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637941961 |
Product | hypothetical protein |
Protein accession | YP_549115 |
Protein GI | 91788163 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000131413 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCC TACTGTCCGT CCTGCTCGCC ACGCTGGCCG CGTGGTCTGC AGCACCCGCC CAGGCGCAAG CGCCCGCAGC GCAGCCCTTT CCTACCCGAC CCGTCACGGT GGTGGTGCCC TTTCCGCCCG GCGGCGGCAC CGATGTCGGC GCCCGTCTCG TGGCCCAAAA ACTCTCGCTC AAATGGGGAC AGCCGGTGCT GGTCGACAAC AAGGCCGGCG CCTCAGGCAT GGTCGGCGCC GATGTCGTCG CCAGGGCCAA GCCGGACGGC TACACACTGC TGGTCGGCAA TGTCGGCACG CAGTCGGTCA ATCCCTCGCT GTACAAAAAA ATGAGCTACG ACCCGGACCG GGCGTTTGCC CCCGTCAGCA TGATCGCCGA GCTGCCGCTG GTGCTGTTGA TCACGCCGTC CCTGCCCTAC CAGTCGATCC GGGACCTGGT GGCTGCCGCC AGATCGGAGC CCGGAAAGCT CAGCTATGCC AGCTCCGGCA GTGGCGGCGC GCCCCACCTG GCGGCTGAAA TATTCAGGAA GTCCGGCGGC GTCAACATGC TGCACGTACC TTACAAAGGC GGTGGTCCCG CCGTGACCGA CCTGATGGCC GGTCACGTCG ACATCCTGTT TGCCACGGTG CTGGAATCCA TCGGCCATAT CAAGTCGGGC AAGCTGCGCG GCCTGGCTGT CAGTTCCGCC AGCCGGTCGC CCGCCCTGCC CGACATGCCC ACCGTTGGGG AAAGCCTGCC AGGCTTTGAC ACCGGCTCCT GGATCGGCAT GCTGGCTCCG GCAGGCACGC CACCCGCCAT CGTCGAAAAA ATCTCTGCCG ATGTCCGCGA AGTGCTGGCC CAGCCCGATA CCCGCCAGAC CCTGATCATG CAGGGGGCCA CGCCCCTGGG GCTCACACCC GCAGCCTTCC AGGCACGCAT CGATGCAGAC CGGCAGCGTT ACGGTCGCAT CATCCGTGAA AGCGGCATCA CGATCGAATA G
|
Protein sequence | MKRLLSVLLA TLAAWSAAPA QAQAPAAQPF PTRPVTVVVP FPPGGGTDVG ARLVAQKLSL KWGQPVLVDN KAGASGMVGA DVVARAKPDG YTLLVGNVGT QSVNPSLYKK MSYDPDRAFA PVSMIAELPL VLLITPSLPY QSIRDLVAAA RSEPGKLSYA SSGSGGAPHL AAEIFRKSGG VNMLHVPYKG GGPAVTDLMA GHVDILFATV LESIGHIKSG KLRGLAVSSA SRSPALPDMP TVGESLPGFD TGSWIGMLAP AGTPPAIVEK ISADVREVLA QPDTRQTLIM QGATPLGLTP AAFQARIDAD RQRYGRIIRE SGITIE
|
| |