| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2282 |
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| Symbol | |
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| ID | 4015049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2372272 |
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| End bp | 2373675 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941949 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_549103 |
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| Protein GI | 91788151 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCA AAGCAATTTA CACGGCGGTC GCGGTTGTGG GCATTGCGGT TGCCTCGGGC
GCTGCATGGT GGTACCAGAA GCCCAAATCC AATGAGGGCC GCGCAGGGGG ATCGTCCGCG
GCATCACCTG CGGCTTCGCC GGTTCAGGGG GCTGCCAGCG CAAATGCAGG CGGCAAGCCG
CCGAGCGTGG AGGTCGCCAG TGTGGAACTC ACCCGCCTCG TGGACGATAC CCAGGCCGTG
GGGACTCTGC GTTCGCGCCG GGGGGTGGTG CTGCGTCCGG AGGTCAGCGG GCGTATTACC
CAGCTCAATT TCGTTGATGG GCAGCGCGTG CACAAGGGCC AGGTGCTGGT GCAGTTTGAT
GACCAGCTGC CGCTGGCGCA AGTCCAGCAA AGCCTGGCTG AGCTGTCGAT TGCCCGGGCC
AACCAGAAGC GTAACCAGGA ACTGGTGGCA CAAAACTTTA TCAGCCAGCG CTCTCTCGAT
GAAAGTGCCG CCAACCTGCA GGTCGCTGAG GCCAAGCTGG CGCTGGCCAG GGCCACTGCG
GCACGCCTGA AAATCGTGGC ACCGTTTGAC GGCATCGTCG GTATCCGGCA GGTCAACGTC
GGCGACTACC TGAAGGACGG TGCGGACATC GTAAATATTG AAGACATTGA AGCCATCTAT
GTTGACTTCA GGCTGCCGGA GCGTTTTCAG AGCAAGATCA AGCGCGGCCA GACGGCGCTG
CTGGACATCG ATGCCTTGCC AGGTCGACCC TACACGGCAC AGATTCAGGC CATTGATCCA
CTGATCGACG CCAATGGCCG CTCAGTGGGG GTTCGGGGAT GCATTGACAA TCGCCAATTG
CAGTTGCGAC CGGGCATGTT TGCGCGCGTC AACACGGTCT TTGGCGTGCG CGATAACGCC
AGGGTGATTC CGGAAGAGGC CATTGTGCCG CTGGGCGGCA GACAGTTCGT CATCAAGCTG
CTGGGTAAAC CGAACGATCC GACCAGGACG ACCCAGCGCG TTGAAGTCAA GGTAGGTTTG
CGCAGCCCTG GCAAGGTGGA AATCCTCGAA GGGCTGGAGC CCGGAGACAC TGTCGTGACG
ACGGGCCAGC AGCGCGTGCA GCGTGACGGT ACTGCCGTCG CTGTGGTGGA TATGGCGAAC
ACCCGATCGG CCCGCCCGGC GGCAGAGCGG CCCGCCACAG GCGCAGCATC CGCAGCCGCT
GCAGCTCCGG CTGCAGCCAG CGCGGCATCA TCGGCCGCTC CTCGTCCAGG CCGTGCAGTG
GCCAATGCCC CGGCGGCGCT GTCGGGCCCC AACCCCTGTG GCGTGCTGGT CTCCGAGGCC
GCCCCGGCGG CGCCTGCACC CATCCGCAAC GCTGCAACAC CCGAGCGTCG ACCTGCCAGC
CCGGCGGGCC GCGACCCGGC CTGA
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| Protein sequence | MASKAIYTAV AVVGIAVASG AAWWYQKPKS NEGRAGGSSA ASPAASPVQG AASANAGGKP
PSVEVASVEL TRLVDDTQAV GTLRSRRGVV LRPEVSGRIT QLNFVDGQRV HKGQVLVQFD
DQLPLAQVQQ SLAELSIARA NQKRNQELVA QNFISQRSLD ESAANLQVAE AKLALARATA
ARLKIVAPFD GIVGIRQVNV GDYLKDGADI VNIEDIEAIY VDFRLPERFQ SKIKRGQTAL
LDIDALPGRP YTAQIQAIDP LIDANGRSVG VRGCIDNRQL QLRPGMFARV NTVFGVRDNA
RVIPEEAIVP LGGRQFVIKL LGKPNDPTRT TQRVEVKVGL RSPGKVEILE GLEPGDTVVT
TGQQRVQRDG TAVAVVDMAN TRSARPAAER PATGAASAAA AAPAAASAAS SAAPRPGRAV
ANAPAALSGP NPCGVLVSEA APAAPAPIRN AATPERRPAS PAGRDPA
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