Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2173 |
Symbol | |
ID | 4015168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2267273 |
End bp | 2268742 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637941843 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_548998 |
Protein GI | 91788046 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.83307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.399177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACC AAGTCTATGA AGCCCAGCGC ACACTGATGG AGCCCTTTGT TGACTTTGCG CAGGCGGCTG CGAAACTCTT CAGCAACCCC TTGTCGCCAG TGGGGCAGAA CCCTTTTGCG CAGCGTGTGG CCGCCGGCTA CAGCCTGATT TACCGCTTGG GCAAAGACTA CGAAAAGCCA ACATTCGACA TCAAGACCGT CGATGTGAAC GGCACGGATG TGACCATCCA CGAACGGGTG GAAATCAACA AGCCGTTTTG CGAGCTGCGC CGCTTCAAGC GCTTCACCGA CGACCCCGCC ACGCTGACCG GCCTGAAGGG CGAGCCGGCG GTGCTGATCG TGGCGCCGCT GTCGGGCCAC TACGCCACCT TGCTGCGCGA CACCGTCAAA ACCATGCTCA AGGACCACAA GGTCTACATC ACCGACTGGA AAAACGCCCG CACTGTCCCT CTGTCCGAGG GTTCGTTCCA CCTGGATGAC TATGTCAATT ACGTTCAGGA ATTCATTCGT CATATCCAGG GCAGTTACGG CAACTGCCAT GTCATCAGCG TTTGCCAGCC AACGGTGCCG GTGCTGGCCG CCGTGTCGCT GATGGCTTCG CGCGGCGAGT TGACGCCCCT GAGCATGACG ATGATGGGCG GCCCGATTGA TGCCCGCAAG TCGCCAACGG CGGTCAACAA CCTGGCAATG AACAAGAGCT TTGAGTGGTT TGAAAACAAC GTAATCTACC GGGTGCCCAG CAACTTCCCG GGCGCGGGAC GGCGGGTCTA CCCCGGCTTT TTGCAGCATA CCGGCTTTGT CGCGATGAAT CCCGACCGCC ACGCCAGCAG CCACTACGAC TATTTCAAGG ATCTGCTCAA GGGCGACGAT GCCAGCGCGG AAGCCCATCG CAAGTTTTAC GACGAGTACA ACGCGGTGCT CGACATGGAC GCGGACTACT ACCTCGACAC CATCAACACC GTATTCCAGG AATTCAAGCT GGTCAACGGT ACCTGGGATG TCGTGGGCGT GGACGGCAAG ATCGAACGCG TGCGCCCCGA AGACATCAAA ACGACAGCCC ACTTCACCAT TGAAGGTGAA CTGGACGACA TTTCCGGCTC TGGCCAGACC GAAGCTGCCC ACGACCTTTG CTACAACGTC CCGAAGGCCC GCCAGAAACA CCTGGAAGTC AAAGGTGCCG GGCACTATGG CATCTTCAGC GGCCGTCGCT GGCGCGAGAT CGTTTACCCG CAGGTCAAAG CCTTTATTTT TGAGCAACAC GGCCAGCGCA AGGCCACCAA CACATTGCCT CCTCTGGCAG TGCAACCGGC AAAGCCAGCC GCGCCATCAA CCGGCACGAC GAAACGCAAT GCCGGCAAAG TGGCCGTAGT AGCTGCCCCC AAGGCAAAAG CGCCAGCAAA AGCGGTCGCA AAACCGGCAG CAAAACCGTC AGGCCGTGGG ACCGCAAAGA CGGCTCGCAA AACAAGCTGA
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Protein sequence | MLYQVYEAQR TLMEPFVDFA QAAAKLFSNP LSPVGQNPFA QRVAAGYSLI YRLGKDYEKP TFDIKTVDVN GTDVTIHERV EINKPFCELR RFKRFTDDPA TLTGLKGEPA VLIVAPLSGH YATLLRDTVK TMLKDHKVYI TDWKNARTVP LSEGSFHLDD YVNYVQEFIR HIQGSYGNCH VISVCQPTVP VLAAVSLMAS RGELTPLSMT MMGGPIDARK SPTAVNNLAM NKSFEWFENN VIYRVPSNFP GAGRRVYPGF LQHTGFVAMN PDRHASSHYD YFKDLLKGDD ASAEAHRKFY DEYNAVLDMD ADYYLDTINT VFQEFKLVNG TWDVVGVDGK IERVRPEDIK TTAHFTIEGE LDDISGSGQT EAAHDLCYNV PKARQKHLEV KGAGHYGIFS GRRWREIVYP QVKAFIFEQH GQRKATNTLP PLAVQPAKPA APSTGTTKRN AGKVAVVAAP KAKAPAKAVA KPAAKPSGRG TAKTARKTS
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