| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2089 |
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| Symbol | |
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| ID | 4015237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2174069 |
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| End bp | 2176561 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637941758 |
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| Product | patatin |
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| Protein accession | YP_548914 |
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| Protein GI | 91787962 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03607] patatin-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0919743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA AAGAACTTCG GTTGGCCGTT GTTTTCTTCG GCGGCGTATC GCTGGCGATT
TACCAGCACG GTATTAATCG CGAAATCCTC AATCTGGTCA GAGCGTCAAA AATCTGCCAC
AGGGATAAAT CCTATGAGGG CGATGAAAAA TCAGCGTCCG CAGCGTCCGC AGCGTCTGGT
TTTCATGACT ATTACCCTGA TGAGCCGGAA AGCTCGACCG GAGACGTTTA CCTCGAATTT
CTGGAAACCC TTGGGCGGGA CGTTGATCTT CGGGTCATCG TCGACGTCAT AGCGGGAGCC
TCTGCGGGGG GCATCAACGG CGTGGCCCTG GCCACGGCGC TGGCCCATGA CCTGAGTCTG
GCGCCTGTCA CGGACATGTG GCTGACCGAC GCCGACATGC TCAATCTGCT GGCGCCCGAG
GCCAGGGCGC GACTCTGGAG CAAGTGGTAT TTTTGGCCGC TCATGCGCCC CTTGCTGACC
CGGCTCGACC GCGAGGGCTT GCTACATGGG AAGGCCGACG CTGAAATGAA GGAGCGGGTC
TCGGTTTTTC TGCGCTCTCG CTGGTTCAAG CCTCCGCTTG ACGGTCGCCG CATGACCGCG
CTGATGCTGG ATGGCCTGGT GGCGATGGGG AAAACCGGCT CGGCTTCGGA GTCGCTGTTG
CCCACGGGGG CAAGGCTTGA CCTTCTGGTC ACCGTGACCG ATTTCAGAGG GCTGGACCGG
CCCATCTTTA TTCATGATCC GCCGGTTGCG CATGAAAGGG AGCATCGCCA CGTTCTTCGC
TTCAGCCTGG AGCATCGCAG AACCGGCCAT CTGCAGAGCG ACTTTGATGT TGATAATCTC
CCGTCTCTTG CCTTTGCAGC CCGGGCATCG GCCTCGTACC CCGGGGCCTT TCCGCCAGCG
CAGATCCGTG AGATCGACGA CATTCTGGCC GAACGCCACA GGCCGTGGCC GGCGCGCACG
CACTTCCTGG ATCGCAATTT CCGGCGCTAC CGTGAGCTGG GAGAAAATCC CGAAGACGCG
GTACTGGTCG ATGGCAGCGT TCTCGACAAC AAGCCCATCA TGGCCTGTGT GGAGGCCATC
CGCACCCATG GCGCTTTCCG TGAAGTGGAT CGCCGCCTCG TCTTCATAGA CCCTCACCTC
AGGCGCGAGA AAGCGGTGTC CGGCAATGGT GTTCCGGGTT TTTTCGCCAC GTTGCGCGCG
GCGCTCTCGG ATCTGCCTCG CCACGATCCC GTTTACAACG AACTGGCAGT GATCAGCCGG
TACAACCGGC AGGCCCGGCG CCTGAAGGCT GCCATCCTGG ACGCGCGCTC CCATGTTGCG
AAGATGATCG AGCAAGCGAC CGCGGGGGGG CTCAAGGGCG AATTCACTGT CGATGACTTG
CGGCACTGGC GGCTCTCATC CATCAACCTC CTGTCCGGTA CAGCGATTGT CTATGACGCC
TGGGTGCGTT CTCTGGTCCT TGAAGGGCTG GACTTCATCG TGCAGATCAT TGTCAGCGCC
TGTCAGTACG CTGCCGATTC GCGGGACGCG CGCCGGATCC AGGAGATTGT CGAGGCGTGG
GCCAGAAATC AGGGGATCAT CGCCGCTTCT TACTCCATGC CGGAACATGT TCATGAGTAT
TCCGAGTTGC CGAGCTTCGG AAAAATCATC GGGAATTTTG GCGTCATCTA CAAAAAGAGG
CGATTGAATT TTGTTCTGCA TGAAATCAAT GATCTTTATC AAAATATTTC AGGGGATGAC
TCCGGTGCGA CCGATCCGCA GTCTCTCGAT CTGTTGAAAA TAAAAATACA AAAATGCATT
GACGAGTTGT CGGTTTATGA CGACATGAAT TTTTTGAGTC GCCAGGCCGT CTCCATGTGC
CGAAGGCTGT TCGTCGGCCG GTTTGCCCAT GAAAAATTGA ACATTGTTTC TGGCGCAGTT
GATTTTCTTG GCAAGGAAGA CCTTGATGAA ATCTCAAAGC TGGTTGAAAG GCTGGGCCAG
GAGTGCGACA TGGAGCGGAC AATGGACAAT ACGGATGCCG TGCTGGCATC CCCCTTGCTC
CTGCGTATGG CTGAGCGGTG CCGTGTTGCC ATACTCACCG GCTATCTCGG CTACCTTTAC
TGGGACATCA TCCTGCGCCC AACGGCCAGT GCCCTGTCAT TGGACGCAGG TCCGATCGAC
GAAATTCTGA TCGACCGCAT CAGCCCCGAA GATGCGACCA CCCTCGCGCT CCCTGATCAG
AAGAGTGTTC TGCAAGGCGG GTCATTCGCC GGCTTTGGCG GTTTTCTCAG CCGGTCGATC
CGTGAAAATG ACTATTTGTG GGGCCGGCTC CATGCGGTGG ACCGGCTCTT CGATATTCTG
GAGAGCACGG TTCCGGCGAA CAGACGCGGC GATTTCGATA TCGCCGCCCT GAAAAAACGT
GCGTTCGGAA AGGTGCTTGA GGAGGAGGCC AAGCGGCTCA GGTTCGTCCC GGAGCTGCTG
GCCCAACTCG GGGAGGCCGT CGCACGCCTT TGA
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| Protein sequence | MKEKELRLAV VFFGGVSLAI YQHGINREIL NLVRASKICH RDKSYEGDEK SASAASAASG
FHDYYPDEPE SSTGDVYLEF LETLGRDVDL RVIVDVIAGA SAGGINGVAL ATALAHDLSL
APVTDMWLTD ADMLNLLAPE ARARLWSKWY FWPLMRPLLT RLDREGLLHG KADAEMKERV
SVFLRSRWFK PPLDGRRMTA LMLDGLVAMG KTGSASESLL PTGARLDLLV TVTDFRGLDR
PIFIHDPPVA HEREHRHVLR FSLEHRRTGH LQSDFDVDNL PSLAFAARAS ASYPGAFPPA
QIREIDDILA ERHRPWPART HFLDRNFRRY RELGENPEDA VLVDGSVLDN KPIMACVEAI
RTHGAFREVD RRLVFIDPHL RREKAVSGNG VPGFFATLRA ALSDLPRHDP VYNELAVISR
YNRQARRLKA AILDARSHVA KMIEQATAGG LKGEFTVDDL RHWRLSSINL LSGTAIVYDA
WVRSLVLEGL DFIVQIIVSA CQYAADSRDA RRIQEIVEAW ARNQGIIAAS YSMPEHVHEY
SELPSFGKII GNFGVIYKKR RLNFVLHEIN DLYQNISGDD SGATDPQSLD LLKIKIQKCI
DELSVYDDMN FLSRQAVSMC RRLFVGRFAH EKLNIVSGAV DFLGKEDLDE ISKLVERLGQ
ECDMERTMDN TDAVLASPLL LRMAERCRVA ILTGYLGYLY WDIILRPTAS ALSLDAGPID
EILIDRISPE DATTLALPDQ KSVLQGGSFA GFGGFLSRSI RENDYLWGRL HAVDRLFDIL
ESTVPANRRG DFDIAALKKR AFGKVLEEEA KRLRFVPELL AQLGEAVARL
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