Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2023 |
Symbol | |
ID | 4015318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2093608 |
End bp | 2094708 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637941691 |
Product | ABC transporter related |
Protein accession | YP_548851 |
Protein GI | 91787899 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.264561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGTGCTG CCTCCAACAA CCTGATTAAC GAAAGACTGC ATATGGACAA GCATCTGGAA CTGCGGGGCG TCAGCAAACG CTTCGGCACG GCGAACGTCC TCAGCGAGGT TGACCTGACC ATCGCCCGCG GGGAATTTGT ATGTTTGCTC GGCCCTTCGG GTTGCGGCAA GACCACGCTG CTGCGCATCA TTTCCGGCTT CGAGAGTGCC AGCAGCGGTC AGCTGCTGCT GGACGGCCAG GAGATCAGCC ATGTGGCTCC GCATCTGCGC GGCTTTGGCA TGGTGTTTCA ATCGCTGGCG CTGTTCCCGC ACATGACGGT GGCCGAAAAC ATTGCCTACG GCATGAAGCT CAAAGGCGTG GCCCCGGCGC AGCGCGCCAA CCGCGTCGAG GAGTTGCTGC ACATGGTGCA ACTGCCGGCG ATCGCAGACC GACCGGTGTC GGCGCTCTCC GGTGGGCAGC GCCAGCGCGT GGCCATTGCC CGTGCACTGG CCGTGCCGCC CAAGCTGTTT CTGCTGGACG AACCGCTGTC GGCCCTGGAT GCGCAGCTGC GCGACAGCAT GCAGGTCGAG CTCAGGCAAT TGCAGCAGCA GTTCGGCGTG ACCACCGTCG TGGTCACGCA CGACCAGCAC GAAGCCATGA TGTTGTCGGA TCGTCTGGTC GTGCTCAAGG GTGGGCGCGT CCAGCAATGC GACACCCCTT CGCAGGTGTA CCGCAAACCG GCCAATGCGT TCGTGGCCGA GTTCCTCGGG GCCGCCAACC TGCTGCCCGG CATGGTGCGT GGCCCGGGCG TGATCGAGGT GCTGGGCGGA TCTCTTGCGC TGCCCACCAG CTTGCCAACT GGCAGCTCCG TGACGCTGGC GGTGCGCTCC GAAGACCTGA AGTTCGAGGC GACCCATGCC GATGCACCGG CACGGCCCAA CAGCATCGCG GGTGAGATTG ATTTCCTGCG CGACCTGGGT TCCAAGTCGG AATTGATCCT GCGCTGTGGC GATGAGCGCC TGCGTTGCCA CGGCAGCGAT GCCCAGTTTC AAAGCGCGCG CTGCGGGCAG CGTGTGAATG TGCTGATCGA TGCCGAACGC TGTTCGGTGT TCGCGACTTG A
|
Protein sequence | MSAASNNLIN ERLHMDKHLE LRGVSKRFGT ANVLSEVDLT IARGEFVCLL GPSGCGKTTL LRIISGFESA SSGQLLLDGQ EISHVAPHLR GFGMVFQSLA LFPHMTVAEN IAYGMKLKGV APAQRANRVE ELLHMVQLPA IADRPVSALS GGQRQRVAIA RALAVPPKLF LLDEPLSALD AQLRDSMQVE LRQLQQQFGV TTVVVTHDQH EAMMLSDRLV VLKGGRVQQC DTPSQVYRKP ANAFVAEFLG AANLLPGMVR GPGVIEVLGG SLALPTSLPT GSSVTLAVRS EDLKFEATHA DAPARPNSIA GEIDFLRDLG SKSELILRCG DERLRCHGSD AQFQSARCGQ RVNVLIDAER CSVFAT
|
| |