Gene Bpro_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2023 
Symbol 
ID4015318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2093608 
End bp2094708 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content64% 
IMG OID637941691 
ProductABC transporter related 
Protein accessionYP_548851 
Protein GI91787899 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.264561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGCTG CCTCCAACAA CCTGATTAAC GAAAGACTGC ATATGGACAA GCATCTGGAA 
CTGCGGGGCG TCAGCAAACG CTTCGGCACG GCGAACGTCC TCAGCGAGGT TGACCTGACC
ATCGCCCGCG GGGAATTTGT ATGTTTGCTC GGCCCTTCGG GTTGCGGCAA GACCACGCTG
CTGCGCATCA TTTCCGGCTT CGAGAGTGCC AGCAGCGGTC AGCTGCTGCT GGACGGCCAG
GAGATCAGCC ATGTGGCTCC GCATCTGCGC GGCTTTGGCA TGGTGTTTCA ATCGCTGGCG
CTGTTCCCGC ACATGACGGT GGCCGAAAAC ATTGCCTACG GCATGAAGCT CAAAGGCGTG
GCCCCGGCGC AGCGCGCCAA CCGCGTCGAG GAGTTGCTGC ACATGGTGCA ACTGCCGGCG
ATCGCAGACC GACCGGTGTC GGCGCTCTCC GGTGGGCAGC GCCAGCGCGT GGCCATTGCC
CGTGCACTGG CCGTGCCGCC CAAGCTGTTT CTGCTGGACG AACCGCTGTC GGCCCTGGAT
GCGCAGCTGC GCGACAGCAT GCAGGTCGAG CTCAGGCAAT TGCAGCAGCA GTTCGGCGTG
ACCACCGTCG TGGTCACGCA CGACCAGCAC GAAGCCATGA TGTTGTCGGA TCGTCTGGTC
GTGCTCAAGG GTGGGCGCGT CCAGCAATGC GACACCCCTT CGCAGGTGTA CCGCAAACCG
GCCAATGCGT TCGTGGCCGA GTTCCTCGGG GCCGCCAACC TGCTGCCCGG CATGGTGCGT
GGCCCGGGCG TGATCGAGGT GCTGGGCGGA TCTCTTGCGC TGCCCACCAG CTTGCCAACT
GGCAGCTCCG TGACGCTGGC GGTGCGCTCC GAAGACCTGA AGTTCGAGGC GACCCATGCC
GATGCACCGG CACGGCCCAA CAGCATCGCG GGTGAGATTG ATTTCCTGCG CGACCTGGGT
TCCAAGTCGG AATTGATCCT GCGCTGTGGC GATGAGCGCC TGCGTTGCCA CGGCAGCGAT
GCCCAGTTTC AAAGCGCGCG CTGCGGGCAG CGTGTGAATG TGCTGATCGA TGCCGAACGC
TGTTCGGTGT TCGCGACTTG A
 
Protein sequence
MSAASNNLIN ERLHMDKHLE LRGVSKRFGT ANVLSEVDLT IARGEFVCLL GPSGCGKTTL 
LRIISGFESA SSGQLLLDGQ EISHVAPHLR GFGMVFQSLA LFPHMTVAEN IAYGMKLKGV
APAQRANRVE ELLHMVQLPA IADRPVSALS GGQRQRVAIA RALAVPPKLF LLDEPLSALD
AQLRDSMQVE LRQLQQQFGV TTVVVTHDQH EAMMLSDRLV VLKGGRVQQC DTPSQVYRKP
ANAFVAEFLG AANLLPGMVR GPGVIEVLGG SLALPTSLPT GSSVTLAVRS EDLKFEATHA
DAPARPNSIA GEIDFLRDLG SKSELILRCG DERLRCHGSD AQFQSARCGQ RVNVLIDAER
CSVFAT