Gene Bpro_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1988 
Symbol 
ID4015356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2055437 
End bp2056291 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID637941655 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_548816 
Protein GI91787864 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.337161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.349812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTG GCACTGTACT GTTTCCGCCC GACCTTGAGC GACGTTTCAG TGGCCTCGCG 
CGACTGTATG GCGTTGCTGG CGCCCGGCGC ATTCGTGAAG CGCATATTGT GGTGGTGGGC
CTGGGCGGGG TGGGCTCGTG GGCTGCTGAA GCGGCCGCCC GCAGCGGTGT GGCCCGCCTG
ACACTGATTG ATTTTGACCA CATCGCTGAA TCCAACATCA ACCGCCAGGT GCATGCGCTC
GACAGCACGC TGGGGCAGGC CAAGGTCCTG GCAATGCGCG ATCGCATCGC CGCCATCCAT
CCCGCCTGCC AGGTGGATTG CATCGAGGAG TTTGTCGATG AAAGCAATTG GCCAGGTCTT
CTTGCGCTGG ACAGCAGCTT CGACGGCAAG CAACTGGCCG TGATCGACGC ATGTGACCAG
GTGAGGGCCA AAACAGCCAT GGCCGCCTGG GCCATCAGGA GTCGGACCAC CCTGATCAGC
GTGGGCGCCG CAGGCGGCAA GCGGCTCGCG CACCGTGTCG ACATTGAAGA CCTGTCGCTG
GTCACGCACG ACCCCTTGCT GGCGCAGCTG CGCTACCGCC TGCGCAAGCA GCATGGCGCA
TCCCGCAAGG GCAAGATCGG CGTGGCCTGT GTTTTCAGCC GTGAGCCGGT GCTGCAGCCT
GCAGCCGTGA ACTCGCTGGA TGAGCAGGAA GACAGCAACG CAGAAGCGCT GGCAATGCAG
TGCGATGCGC CCCTGCAGGG CGTCACGCAG AGTGACGGCA GCCTCAACTG CCACGGCTAT
GGATCGGTTG TCAGCGTCAC ATCCACCTTC GGGCTTTGCG CGACCGGCTG GGTACTCAGC
AAAATTGCTG GGTAG
 
Protein sequence
MTSGTVLFPP DLERRFSGLA RLYGVAGARR IREAHIVVVG LGGVGSWAAE AAARSGVARL 
TLIDFDHIAE SNINRQVHAL DSTLGQAKVL AMRDRIAAIH PACQVDCIEE FVDESNWPGL
LALDSSFDGK QLAVIDACDQ VRAKTAMAAW AIRSRTTLIS VGAAGGKRLA HRVDIEDLSL
VTHDPLLAQL RYRLRKQHGA SRKGKIGVAC VFSREPVLQP AAVNSLDEQE DSNAEALAMQ
CDAPLQGVTQ SDGSLNCHGY GSVVSVTSTF GLCATGWVLS KIAG