| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1809 |
|---|
| Symbol | |
|---|
| ID | 4015557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1872431 |
|---|
| End bp | 1873531 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637941480 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_548642 |
|---|
| Protein GI | 91787690 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.7833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000312288 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCT TGAACAAGCC ACATTTACCC CCCGTTTTAT CCGCCACCCC GGCGCCCCCG
CGCTTTCAAT CGTTTGACCT GCTGGCCACG CTCGTGGCCG TTGTGCGTAC CAATGGCGTC
GTGGTATTTG CCAATGCGGC GCTGGAAGAT GCGCTGGGCA CCTCACGCCG GACCATCGAA
GGCTCGCAGC TCCCCGAGTG CTTTACCGAG CCGCTGATTC TGCAAAATGC GCTCGAGGGC
GCCGGCAGCA ATGAGTTTGC GGCCCTGCGT TATGACGCGT GGCTCAGGCG CCTGAACCAC
GAGCCCATGC CGGTCCACGT GGTGGTGGCG CAAACCGATA CGCCGGGCGA GGCGATTGTG
GAGTTGTTGC CGCTGGAGCA GCAGGCCAAG CAGGACCGGG AGGAACGCCT GATTGACCAG
GCCCAGGCCA ACAAAGAACT GATCCGCAAC CTGGCCCATG AAATCAAGAA TCCGCTGGGT
GGCATTCGCG GTGCGGCGCA GTTGCTGCAG ATGGAAATCG ACAAGGAGTT GACCGAGTAC
ACGCAGGTCA TCATTCATGA GGCCGATCGC CTGCAAACGC TGGTAGACCG CCTGCTCGCT
CCGCACCGGC GGCCGCATCT GGTGGGGGAT GTGAATATTC ACGAAGTCTG TGAGCGGGTG
CGCTCGCTCA TCCTTGCCGA ATTTCCCAAG GGGCTGCGCG TCACACGGGA CTATGACATT
TCGATTCCCG GTTTCCGCGG TGACCGCGAG CAGCTCATTC AGGCGGTCCT CAATATCGCC
CACAACGCGG CTCAGGCGCT CGCAGAGCGC ATTGCGGCGG GCGATGCGCA GATCACTTTC
AGGACCCGAA TCGCCCGGCA GGTAACTTTC GGCAAGCAGC GCTATCGCTT GGCACTGGAA
TTGCATGTCA TTGACAATGG ACCGGGCGTG CCGGACTCCA TCAAAGACCG CATCTTCTAT
CCGCTGGTAT CAGGGCGCGA GGGCGGTTCG GGGCTGGGGC TGACATTGGC GCAAACCTTT
GTTCAGCAAC ACCACGGTTT GATTGAGTGC GACAGCGTGC CGGGCCGGAC AGACTTCAAG
CTGCTGATAC CGTTGCCTTG A
|
|---|
| Protein sequence | MDGLNKPHLP PVLSATPAPP RFQSFDLLAT LVAVVRTNGV VVFANAALED ALGTSRRTIE
GSQLPECFTE PLILQNALEG AGSNEFAALR YDAWLRRLNH EPMPVHVVVA QTDTPGEAIV
ELLPLEQQAK QDREERLIDQ AQANKELIRN LAHEIKNPLG GIRGAAQLLQ MEIDKELTEY
TQVIIHEADR LQTLVDRLLA PHRRPHLVGD VNIHEVCERV RSLILAEFPK GLRVTRDYDI
SIPGFRGDRE QLIQAVLNIA HNAAQALAER IAAGDAQITF RTRIARQVTF GKQRYRLALE
LHVIDNGPGV PDSIKDRIFY PLVSGREGGS GLGLTLAQTF VQQHHGLIEC DSVPGRTDFK
LLIPLP
|
|---|
| |