| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1789 |
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| Symbol | rpsA |
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| ID | 4015574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1848811 |
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| End bp | 1850496 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637941461 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_548623 |
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| Protein GI | 91787671 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00123989 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGAAT CTTTTGCCGA TCTATTCAAC GAATCACTGC AACGCTCCGA AATGCGTACC
GGTGAAGTCA TTACTGCTGA AGTAGTGCGC ATCGATCACA ACCACGTGGT TGTGAACGCC
GGACTCAAAT CCGAGGCCTA TGTCCCCCTC GAAGAATTCA AAAACGACCA GGGCGAGCTT
GAAGTCCAGG TCGGCGACTT CGTGTCCGTG GCCATCGACT CCGTCGAAAA CGGCTATGGC
GACACCCTGC TGAGCCGCGA CAAGGCCAAG CGCCTGGCAT CGTGGATGAG CCTGGAAAAA
GCCCTGGAAT CCGGCGAGTT CGTCACCGGC CAGACCAGCG GCAAGGTCAA GGGCGGTCTC
ACCGTTCTGG TCAACGGCAT CCGCGCCTTC CTGCCCGGCT CGCTCATCGA CACCCGCCCC
ATCAAGGACT TGTCTCCGTA CGAGAACAAG ACCATGGAAT TCAAGGTCAT CAAGCTCGAC
CGCAAGCGCA ACAACGTGGT GTTGAGCCGC CGCGCCGTGG TGGAAGCCAG CATGGGCGAA
GAGCGCGCCA AGCTGATGGA AACCCTGAAA GAAGGCACCG CAGTCAAGGG CATCGTCAAG
AACATCACCG AATACGGCGC GTTCGTTGAC CTCGGCGGCA TTGACGGCCT GCTGCACATC
ACCGACATGG CATGGCGCCG CGTGCGTCAC CCAAGCGAAG TGGTGACGGC TGGCCAGGAA
ATCGTGGCCA AGATCCTGAA GTTCGACACC GAGAAAAACC GCGTGTCCCT CGGCCTCAAG
CAGATGGGCG ACGACCCATG GATGGGCGTA AACCGCCGCT ACCCCCAAGG CACCCGCCTG
TTCGGCAAGA TCACCAACAT CGCCGACTAC GGCGCGTTTG TGGAACTCGA ACCCGGCATC
GAAGGCCTGG TCCACGTGTC CGAGATGGAC TGGACCAACA AGAACGTGGC ACCGAGCAAG
CTCGTGGCGC TGGGCGACGA AGTCGAAGTC ATGGTCCTCG AGATCGACGA AGACAAGCGC
CGTATCAGCC TGGGCATGAA GCAGTGCAAG GCCAACCCAT GGCAAGAGTT TGCCCAGGAC
ACCAAGCGCG GCGACCGCGT CAAGGGCCCG ATCAAGTCGA TCACCGACTT CGGCGTCTTT
GTGGGCCTGG CTGCCGGCAT CGACGGCCTG GTGCACCTGT CTGACCTCTC ATGGAACGAA
CCCGGCGAAG CCGCTGTTCG CAACTACAAA AAGGGCCAGG AAGTTGAAGC CATTGTGCTG
GCTGTCGACG TCGACCGCGA GCGCATCTCC CTGGGCATCA AGCAGTTGGA CTCTGACCCG
TTCACCACGT TCGTGTCGAT CAACGACAAG GGCGCAATCG TGACTGGCAA GGTCAAGACC
GTTGACGCCA AAGGTGCCGA GATCGATCTG GGCGAAGACA TTATTGGCTA CCTGCGCGCC
AGCGAAATCA GCCGTGACCG CGTTGAAGAC GCGCGCAACG TGCTGAAAGA AGGCGACGAA
GTGTCTGCCG TCGTGGTGAA CGTGGATCGC AAGACCCGCA ACATCCAGCT GTCGGTCAAG
GCCAAGGACA ACGCGGACCA GCAAGAGGCC ATGGCCAACC TGAGCCAGCA GTCCTCGCGT
GAAAACGCTG GTTTGACCAA CCTGGGCGCC CTGCTGCGTG CCAAGCTGGA CAACAACGAG
AAGTAA
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| Protein sequence | MSESFADLFN ESLQRSEMRT GEVITAEVVR IDHNHVVVNA GLKSEAYVPL EEFKNDQGEL
EVQVGDFVSV AIDSVENGYG DTLLSRDKAK RLASWMSLEK ALESGEFVTG QTSGKVKGGL
TVLVNGIRAF LPGSLIDTRP IKDLSPYENK TMEFKVIKLD RKRNNVVLSR RAVVEASMGE
ERAKLMETLK EGTAVKGIVK NITEYGAFVD LGGIDGLLHI TDMAWRRVRH PSEVVTAGQE
IVAKILKFDT EKNRVSLGLK QMGDDPWMGV NRRYPQGTRL FGKITNIADY GAFVELEPGI
EGLVHVSEMD WTNKNVAPSK LVALGDEVEV MVLEIDEDKR RISLGMKQCK ANPWQEFAQD
TKRGDRVKGP IKSITDFGVF VGLAAGIDGL VHLSDLSWNE PGEAAVRNYK KGQEVEAIVL
AVDVDRERIS LGIKQLDSDP FTTFVSINDK GAIVTGKVKT VDAKGAEIDL GEDIIGYLRA
SEISRDRVED ARNVLKEGDE VSAVVVNVDR KTRNIQLSVK AKDNADQQEA MANLSQQSSR
ENAGLTNLGA LLRAKLDNNE K
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