Gene Bpro_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1669 
Symbol 
ID4015688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1723260 
End bp1723967 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content60% 
IMG OID637941341 
ProductTetR family transcriptional regulator 
Protein accessionYP_548503 
Protein GI91787551 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTT CCAAACTCTT CTGCCCAACA GCCCCCGGGG TCGCCGCCAA GCGCGAACGC 
CGCAAGGAAG CCCGGCCCGG CGAGCTGCTG GATGCCGCGC TGGATCTGTT CGTCGAAAAG
GGCTTTGCCG CCACCCGGGC GGAAGAAGTG GCGGCGCGTG CCGGCGTTTC CAAGGGCACC
CTCTTTCTGT ACTTTCAAAG CAAGGAAGAA CTGCTCAAGG CGGTGGTGCG CGAAAACATC
TCCGGCCGTT TCAAGGAATG GAACGAGGAA CTCGAGAACT TCGAAGGCAC CAGTGCAGAA
ATGCTGGCCT ATTGCATGAA TATGTGGTGG GACCGCGTGG GTGCCACCAA AGCCTCGGGC
ATCACCAAGC TGATGATGAG CGAGGCAAAG AACTTCCCGG AGATCGCGGC CTTTTACCAG
CAGGAAGTGA TCCAGCCGGG GCAGAGCCTG ATCCGCCGCA TTTTGCAACG AGGCATAGAG
CGCGGCGAGT TCCGCGACAT GGACCTCGAC TACGGCATCT ATACCGTGAT CGCGCCCATG
ATTTTCCTGA TACTGTCCAA ACACTCGATG GGCGTGTGCG TTCGCGACGA CATCGACATG
GACCCCAAAA AATACGTTGC CACTCAGGTG AACACCATTC TTTACGGCAT GAGTGTTCGC
CCCGGCGATT CGGGCCAGGG CCAGAGCCAG GGCCCGGAGC AAGCCTGA
 
Protein sequence
MSLSKLFCPT APGVAAKRER RKEARPGELL DAALDLFVEK GFAATRAEEV AARAGVSKGT 
LFLYFQSKEE LLKAVVRENI SGRFKEWNEE LENFEGTSAE MLAYCMNMWW DRVGATKASG
ITKLMMSEAK NFPEIAAFYQ QEVIQPGQSL IRRILQRGIE RGEFRDMDLD YGIYTVIAPM
IFLILSKHSM GVCVRDDIDM DPKKYVATQV NTILYGMSVR PGDSGQGQSQ GPEQA