Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1548 |
Symbol | |
ID | 4015827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1598299 |
End bp | 1600365 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637941224 |
Product | AAA ATPase, central region |
Protein accession | YP_548390 |
Protein GI | 91787438 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000910509 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.627937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTA GATCACATTA CCTGAATCGC CTTCTGCAAA CAGTAGGATT TTGGCTGTTT GGCGTATTGC CAGCAGCCAT TGCCGTCCTG TCCGCCATGA TGCTGTTCGG TGTCTGGACG AGCAGCAAGG AAGCTCCGCT GAGCTTCCGA GTCCTCGGTA ACTTCACCCC CGAAGCCGGT GTGTTGCTGT GCTTGATTGC CTACCAACTG CTGCTTCATG GGGCGCGCAT CTGGATGTGC AAGCGCCTTG CAGATGCAAA CGGCACGATT CCCTATGAGC CAGAATTGAC CAGTGACAGC CTTCGTGCCT TTGTGCCCGC AGTCATGACG CCTTACATCG TGTTCTTCGC CTTGTGGGGT GCCTTTGGCA CCAAGGTTGC AGCAACCAAC TATGTGCTGG TGGCTGCATT TGGCGCCATG ACGTTCCTGA GCTGGGTCAT CATCAAAACG GGGTGGCTCT ACGGTTTCAT CATTGGCCAG CGCTCACGTG TGCATTACGG TGATTCCACC GAGCAAGTAC AGCGCTCGAA CGTGGCCCGC AAGGAAGTGG CCAAGATCAC ATTCAAGGAC ATTCACGGCA ACACAGCGAT CAAGCGTCGA CTGTTGGAGG CTGGCCGCGC CATCGTGGAT GCGCCTAAGG GTGGCCAGGG CAAGGCCCGA AACGGTATCT TGATGGACGG TGAACCCGGC AATGGCAAAA CGGTCTTTGC CGAAGCGCTT GCCGGTGAGC TCAAGCTCCC ATTGCTGACA CTCACCCACT CGGATGTGGC CAGTCGCTGG GTAGGAGAAC GCACCGAAAA AGTGAAGGCC GCTTTTGAGC AGGCGATTCG ATCACAGCCC TGCGTCTTCT TCATTGACGA AATCGACAGC TTCTTGCCTG ATCGGTCAAC GGATAGCGCC CAGACCAAGG AAGACAGCGA TATCACCAAT TCCCTTCTGA CGCTGCTGAT CGAAATTCGC AAGCATCGTG TGGTGGTCGT GGCTGCAACG AACTACGTGG ATCGCCTTGA CGGTGCCGCC ATTCGTGAAG GCCGGTTTGA CTTCAAGGTC GAAATCACCC CGCCGGATGA AGCAGCGCGT ATTGGCCTGC TGACCGCCGG TTTAAGCACC AACGCACCCA CTTTGCGTGT GAGCCAGGCG ACTATCAAAA GCGTCGCTCA ACGTTGGAAT GGCTTTTCCG TGAAGCGAAT CCTTGCCGTG ACTGAGGAAA TGCCTTCCTA CGTGGCAGAA GCACGTGAGC AAGGTACTTT CAAGGGTGAG CTGGAGTTTG ACGACTTCAT GGCCGCATTG CGCCGGCTGC AGGGCCGTAA GGGTGCCATG CCTGAGAACG TCAAGGCCAT GGCTGACCTG GTGCTGCCGG AGGTGACGCG GGAAGCCCTC ACGATGCTTG CAAGCCGCCT GAAAGACCCA CAGCGCATTG AGCGCCTCGG TGGCACATTG CCCTCTGGCG TCCTGTTCTT CGGCCCACCT GGCACGGGTA AGACCGCCGC TTGCAAGGCT CTGGCGAAGG ACGTCCAGTG GGCTTTCCTG ATCAAGACCG GCCCCGACCT GGTGCGTGAC CCCAAGGCCC TGGACAAGCT CTACGCGCAG GCCAAGGATT TGCGTCCGTG CATCATCTTT GTGGACGAGG CAGATGATTT GCTGCTTTCC CGTGAAGCAC CACGAAATAC GGAAGCCACC AATAAACTTT TGACCATCAT GGATGGCGTG AATGACCGTG TGCGTGACGT GGTGTGGGTG GCTGCTACCA ACAATCCAGA GCGGATTGAT TCCGCTCTGC TGCGTGGTGG TCGGTTCACA GAGAAGGTTG AATTTGTTCG TCCAGACGAA GACCAGTTGA CCACGCATAT CGGACAGTGG TTCACAAACC GCAGGATTGG TTTGAAGTCT GGTTTGGATT CCTCGACTAT TGCATCCATG TTGGGTGACG AAAGCATTGC CAACGCTGAG GCTGTGTTGC AGTACGCAGT CAACCGTGCA ATCTCTCAGT CGAACGATGA TTTCATTGAA GTTGGTGTTG CCGATGTGCA GAGAGGTGTG GCGATGGTTT TGGGGACTGC GTGCTGA
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Protein sequence | MEARSHYLNR LLQTVGFWLF GVLPAAIAVL SAMMLFGVWT SSKEAPLSFR VLGNFTPEAG VLLCLIAYQL LLHGARIWMC KRLADANGTI PYEPELTSDS LRAFVPAVMT PYIVFFALWG AFGTKVAATN YVLVAAFGAM TFLSWVIIKT GWLYGFIIGQ RSRVHYGDST EQVQRSNVAR KEVAKITFKD IHGNTAIKRR LLEAGRAIVD APKGGQGKAR NGILMDGEPG NGKTVFAEAL AGELKLPLLT LTHSDVASRW VGERTEKVKA AFEQAIRSQP CVFFIDEIDS FLPDRSTDSA QTKEDSDITN SLLTLLIEIR KHRVVVVAAT NYVDRLDGAA IREGRFDFKV EITPPDEAAR IGLLTAGLST NAPTLRVSQA TIKSVAQRWN GFSVKRILAV TEEMPSYVAE AREQGTFKGE LEFDDFMAAL RRLQGRKGAM PENVKAMADL VLPEVTREAL TMLASRLKDP QRIERLGGTL PSGVLFFGPP GTGKTAACKA LAKDVQWAFL IKTGPDLVRD PKALDKLYAQ AKDLRPCIIF VDEADDLLLS REAPRNTEAT NKLLTIMDGV NDRVRDVVWV AATNNPERID SALLRGGRFT EKVEFVRPDE DQLTTHIGQW FTNRRIGLKS GLDSSTIASM LGDESIANAE AVLQYAVNRA ISQSNDDFIE VGVADVQRGV AMVLGTAC
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