Gene Bpro_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1439 
Symbol 
ID4011314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1488196 
End bp1488846 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID637941118 
Productamino acid ABC transporter permease 
Protein accessionYP_548285 
Protein GI91787333 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.209302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGT TTCTGCACCA TGCACGGGAG TTCATGCCCA TCCTGCTCCA GGGGGCCTGG 
CTCACCATCC TCGTGACGCT GGGCTCCTTG CTGCTGTCCA CCATGCTGGG CCTGGTGTGG
GCCGTCATGC GCGTGTCGGG CATCCCGCTG CTGGCCAATG CAAGTGCCGC CGTCATCAAC
CTGCTGCGCG GTATCCCGAT CATCGTGATC TTGTTTTTCC TGTATTTCGT GATGCCTGAT
GTCGGCATTT CGCTGTCGGC GCTGCAGGCC GGCATCCTCG GCCTGGGCAT CGCCTATTCG
GCCTACCAGG CCGAGAATTT CCGCGCCGGC ATCGAAGCGG TGGACCATGG CCAGGTCGAG
GCGGCCCGTG CCATGGGCAT GAGCTGGGGG CTGATGATGC GCCGCGTGGT GCTGCCGCAG
GCCGTCAAGA TCGTGCTGCC GCCCTACGGC AACATCATGA TCATGATGCT CAAGGATTCG
TCGCAGGCCT CGACCATCAC CGTCGCCGAA CTGGCGCTGC AGGGCAAGAT GATCGCCACG
TCCACCTTCC AGAACGCGAC CGTTTTCACG CTGGTCGCGC TGATTTACCT GGTCATGTGC
GTGCCGCTGA TTCTGCTGGT GCGCCATCTT GAGAAGCGGG GCAAAAAATG A
 
Protein sequence
MIQFLHHARE FMPILLQGAW LTILVTLGSL LLSTMLGLVW AVMRVSGIPL LANASAAVIN 
LLRGIPIIVI LFFLYFVMPD VGISLSALQA GILGLGIAYS AYQAENFRAG IEAVDHGQVE
AARAMGMSWG LMMRRVVLPQ AVKIVLPPYG NIMIMMLKDS SQASTITVAE LALQGKMIAT
STFQNATVFT LVALIYLVMC VPLILLVRHL EKRGKK