Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1439 |
Symbol | |
ID | 4011314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1488196 |
End bp | 1488846 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637941118 |
Product | amino acid ABC transporter permease |
Protein accession | YP_548285 |
Protein GI | 91787333 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.209302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCAGT TTCTGCACCA TGCACGGGAG TTCATGCCCA TCCTGCTCCA GGGGGCCTGG CTCACCATCC TCGTGACGCT GGGCTCCTTG CTGCTGTCCA CCATGCTGGG CCTGGTGTGG GCCGTCATGC GCGTGTCGGG CATCCCGCTG CTGGCCAATG CAAGTGCCGC CGTCATCAAC CTGCTGCGCG GTATCCCGAT CATCGTGATC TTGTTTTTCC TGTATTTCGT GATGCCTGAT GTCGGCATTT CGCTGTCGGC GCTGCAGGCC GGCATCCTCG GCCTGGGCAT CGCCTATTCG GCCTACCAGG CCGAGAATTT CCGCGCCGGC ATCGAAGCGG TGGACCATGG CCAGGTCGAG GCGGCCCGTG CCATGGGCAT GAGCTGGGGG CTGATGATGC GCCGCGTGGT GCTGCCGCAG GCCGTCAAGA TCGTGCTGCC GCCCTACGGC AACATCATGA TCATGATGCT CAAGGATTCG TCGCAGGCCT CGACCATCAC CGTCGCCGAA CTGGCGCTGC AGGGCAAGAT GATCGCCACG TCCACCTTCC AGAACGCGAC CGTTTTCACG CTGGTCGCGC TGATTTACCT GGTCATGTGC GTGCCGCTGA TTCTGCTGGT GCGCCATCTT GAGAAGCGGG GCAAAAAATG A
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Protein sequence | MIQFLHHARE FMPILLQGAW LTILVTLGSL LLSTMLGLVW AVMRVSGIPL LANASAAVIN LLRGIPIIVI LFFLYFVMPD VGISLSALQA GILGLGIAYS AYQAENFRAG IEAVDHGQVE AARAMGMSWG LMMRRVVLPQ AVKIVLPPYG NIMIMMLKDS SQASTITVAE LALQGKMIAT STFQNATVFT LVALIYLVMC VPLILLVRHL EKRGKK
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