| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1406 |
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| Symbol | |
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| ID | 4011786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1444003 |
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| End bp | 1447206 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941086 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_548253 |
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| Protein GI | 91787301 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGTG ACACGAGCGG GGTCGGTGGC AAACGGCCGA CGCGGTTACA GGTCCGACTT
CTTGGTGCAG TCGAGATCAT CTTGGACGGC CGGCGTCTTC GCGCCTTCAA CTCTCTTCGC
TTGCAACGGT TCCTGGGGTT GATCGCGTTA CGGAGAGACC CGCAGCACCG CTCACGACTC
GCGTTCGAGC TCTGGCCCGA CTCCGACGAA CATCAGGCGC GCACCAACCT CAGAAAGCTG
CTCCACGACT TCCGTCATTC CCTTCCTGAC ATCGGTGAGT TCGTCGAGAT CGACAACGAG
ACTGTGCAGT GGATGCCGAG TGGGTCGAGC GAGGTCGACG TGCTGAAGTT CCAGGATGCC
ATGGCGGCCG GTGATTTCGA GCTCGCCGCG CGCCTCTATT CGGGCGATCT CCTTCCGGCT
TGTTATGACG ACTGGGTCCT GAATGAGCGA GCGAAACTTC GAGCTGATGC GTATGGGGCC
CTCGTGCGGC TGACAGGAGA GGCTGCGAGG CGCGACGACC ACAAAGCCGC GATCAGGCAT
GCCCAACGCA TTGTCGACCT GGAGCCGACC GACGAAGCGG CCGTTCGAAT TCAGATGCAA
GCACATCTCG CGCTTGGCGA TAGAGCCGCG GCGCTGCGCT CCTACCACCG GTACGCGGAG
GTGCTCGAGC GCGACCTCGC GGTGGCACCA GGCGAGGCGA TCAGGGCCAT GTACCAACAG
CTCCGGGCTG GCACACTCAA CCGCGACGAA GTGCAGGGCA AGGACCTACC CGTCGCCGAA
TCGCCTTTCG TCGGCCGCGA CCGCGAGTGG AACCAGCTCA TCGAGGCATG GAACACCGCG
CGGGAGACGG GGGCACATCT CTTGTTGGTG ACCGGGGAAC CGGGGATCGG AAAGTCCCGT
CTCGCATTGG AACTCGGCCG CCGCGTTCGA TCAGAGGGAC ACGTGGTGGC ATCGGCTCGT
GCATACGAGG CTGCGGGCCG ACTGCCGTGG GGTCCCGTCG TGGACCTGCT CCGATCGGAC
GCGCTGCGAA ACCACATCGA CACGCTCGAC ACGGTCTGGA GGGCCGAGCT TGCTCGTCTC
CTGCCCGAGC TCCTCGACGC TTCCCGGTCA TCTGAATGGA GCCAGGCGGG CGACTCGGCT
CAGCGCCATC GGTTGTTCGA TGCTGTGAAC CGAGCCATCG TCGTCGGCGA CCGCCCGCGC
TTGCTGATCA TTGACGATCT GCAGTGGTGT GACGCCGAGA CCATTGAGTT AATCGGTTTC
GTTGTCCGTT CCGGAAAGAC GGCACCAGTC CTCATCGTCG GTACTGTCCG CTGGGAGGAG
ATCCCACAGC ATCATCCCCT CGTTGGACTC GTAGACGCCT TGGGCCACGA CCAGGCGGTG
ACTATCGTGC CACTCGACCG ACTCGACGAA GCCACCACTG CGACGCTCGC TGCCCGGCTA
CGCGATGAAG ACACGATTGA TCCGGAACTG GCGGCACGAC TCTGGCGCGA GACAGAAGGC
AATCCGCTCT TTGTCATCGA AACTCTTCGA GCCGGGATCT CCTCTGGTGG AAGCCAGGCA
GTCCTCACAC CGACGATGCG GGCGGTGCTG CGCGCCCGAC TGGGCCAACT CACTGACGGT
GCTCGGCGAC TAGCCGAAGT GGCGGCCGTC ATCGGTCGGC CCTTCTCGAT CGGTCTGATG
GTCTCGGCCA CTAAGGCCGA TGAGCGCGAG CTCGTCGAGC ATGTCGACGA ACTCTGGCGT
CGCCGGATCA TTCGCGAACA GGGGCTCACG TACGATTTCA GTCACGACAA GCTTCGGGCG
GTTGCCCTGG AGATGGTCAG TCCGGCTCGT CGACGTCAAC TTCACCGGGC CGTCGCCGAG
GCGATTGCGG TCGAGCTCCA CAGCGACATC GACGCGGCCA GCCCGCAGCT GGCCGCACAC
TACGACCAGG CCGGCATGGC CGAGCCGGCC ATCGATGCCT ACCGGGTGGC GGGGGCCCGA
GCGGCGGCCG TGTCGGCCTT GGAAGAAGCG GTCACCATGT TTCAGCGAGC GCTCGCACTG
CTCGCCGATC TGCCACCGTC ACCCGACCGC GATGCACTCG AACTCTATAT CCGGATCGCC
CTCGGATCCC CGCTTGTTGC CCTCGACGGT TACGGCTCCA AGGGTGCGCA CCAACTCTAC
GAGCGAGCCC TTTCGCTTTG CCGCAAGCTT CACAGACCCG TGGACCCGCC GATCCTCCGT
GGCCTCGGCC TTGCCCGGCT GCAGGGCTGC CGCTTCGACG ATTGCGATGA ACTCGCCCAC
GTCCTTCTCG ACGATGATAG TCATGATCCG ATCGCCGGGA CAGAGGGCCG ATATCTCCTC
GGCGTGAGCG CGTTCTGGCG GGGCGATCTG GCCAGAGCCC GCCCCTATCT CGATGGCGCT
ATCGAAGCCT ATCGCGTGTC CCATCGCGAC GAGCATCTGA GCTTGTACGC CCAGGACCCG
AAGGCGGTTT GCCTCGTACG GCTGGCCTGG GTCGAGCTGT GGGCCGGAGA TGCTGGCCGG
GCCGACGAGA CAGCCCGATC TGCTCTTGAG ATCGCCGTCG ATCTCGATCA TCTGATGACC
TTGGGGTACG TGATCACTTA CGCGGCGATC ATCGCGGCCG AATCCGAAGA TCTCGCCCGC
CTCGCCGAGC TGCTCGGGGA TGCCGACCGT CTATGGAAGC GTTTTTCGGA CCGTTACCTC
ATGGTTGTCC TGCAGGCCCT TCGGGGCTGG CTGGACGTGT GCGGGGGATC GGCTGATGGC
ATCGAGAAGA TCGTGCGGTC GGTAGCGCGC TCGCGTACCG AAGGGGAGAC CCTTCATCTG
ACCTACACCC TTCTTCTCCT CGCCCGGGCT CGCGGCATGC TCGGCGAGCT CCGCCAGGGA
CGAGCCGCCG CATGCGAGGG GCTCTCGTGG TCACACCGCT GCAACCAGCG CTATCTCGAG
GCCGAGCTGT GGCGAGTCGA CGGTGAGCTG GCTTATCGCA GCGGGGAAAC CGAAGCCGCC
GCCGCTTCTC TGCGCAGTGC CGTCGAGATC GCCGGCGCTC AAGGGGCGGG CTGGCTGGAG
CTTCGGGCGC TCCACTCCTT GGCCAGTCGA TTTCCCGATG AGGCATTGCG CGAACAGCTT
GGGGAGCTCC TCGAGACCAT TCCGTCGGGC CATGATCTCC CGGCGTTCCG GGCCGCGATC
GGTTTTCTGA GCGATTCCGG CTGA
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| Protein sequence | MPSDTSGVGG KRPTRLQVRL LGAVEIILDG RRLRAFNSLR LQRFLGLIAL RRDPQHRSRL
AFELWPDSDE HQARTNLRKL LHDFRHSLPD IGEFVEIDNE TVQWMPSGSS EVDVLKFQDA
MAAGDFELAA RLYSGDLLPA CYDDWVLNER AKLRADAYGA LVRLTGEAAR RDDHKAAIRH
AQRIVDLEPT DEAAVRIQMQ AHLALGDRAA ALRSYHRYAE VLERDLAVAP GEAIRAMYQQ
LRAGTLNRDE VQGKDLPVAE SPFVGRDREW NQLIEAWNTA RETGAHLLLV TGEPGIGKSR
LALELGRRVR SEGHVVASAR AYEAAGRLPW GPVVDLLRSD ALRNHIDTLD TVWRAELARL
LPELLDASRS SEWSQAGDSA QRHRLFDAVN RAIVVGDRPR LLIIDDLQWC DAETIELIGF
VVRSGKTAPV LIVGTVRWEE IPQHHPLVGL VDALGHDQAV TIVPLDRLDE ATTATLAARL
RDEDTIDPEL AARLWRETEG NPLFVIETLR AGISSGGSQA VLTPTMRAVL RARLGQLTDG
ARRLAEVAAV IGRPFSIGLM VSATKADERE LVEHVDELWR RRIIREQGLT YDFSHDKLRA
VALEMVSPAR RRQLHRAVAE AIAVELHSDI DAASPQLAAH YDQAGMAEPA IDAYRVAGAR
AAAVSALEEA VTMFQRALAL LADLPPSPDR DALELYIRIA LGSPLVALDG YGSKGAHQLY
ERALSLCRKL HRPVDPPILR GLGLARLQGC RFDDCDELAH VLLDDDSHDP IAGTEGRYLL
GVSAFWRGDL ARARPYLDGA IEAYRVSHRD EHLSLYAQDP KAVCLVRLAW VELWAGDAGR
ADETARSALE IAVDLDHLMT LGYVITYAAI IAAESEDLAR LAELLGDADR LWKRFSDRYL
MVVLQALRGW LDVCGGSADG IEKIVRSVAR SRTEGETLHL TYTLLLLARA RGMLGELRQG
RAAACEGLSW SHRCNQRYLE AELWRVDGEL AYRSGETEAA AASLRSAVEI AGAQGAGWLE
LRALHSLASR FPDEALREQL GELLETIPSG HDLPAFRAAI GFLSDSG
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