| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1354 |
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| Symbol | |
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| ID | 4011965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1393767 |
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| End bp | 1394816 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637941034 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_548201 |
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| Protein GI | 91787249 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG TGCTTGATTC CACCCGCGCT ATGGACCGCA AGCTGGACCA CACCCTGGAC
CGCGCCAACA GTGACGTGGT GCTGATCGTG GACGACGTGC CGGACAACCT CTCGGTGCTG
CATGATGCGC TCGATGAGTC GGGTTACACC GTGCTGGTCG CCACCAGCGG CGAAGCCGCC
CTGAACCGGG CCCGGCAGGC CGTGCCGGAC ATCGTGCTGC TCGACGCCAT GATGCCTGGC
ATGGACGGCT TCGAGGTGGC CAAACGCCTG AAAGCCATGG CCGAGACGGC GCACATTCCC
ATCATCTTCA TGACCGGGCT GACCGAGACC GAGCATCTGG TCGCTGCGCT GGAGGCAGGC
GGCGTCGATT ACGTGACCAA GCCGATCAAG CCCAAGGAGG TCATGGCGCG CATGGGGGTG
CACCTGCAGG GCGCTCGCCG TGCCCGGCAG GAGGCCCGGC AGGCGGGCCA GGCGCGCAAT
GCGCTGGATG CGTTCGGCTA TGCCAGCATC ACGGTGCGCA TGGGCGGGCC GGGCGACGGC
AGGCTGATCT GGCAGACCCC GCTGGCGCGC GACCTGCTGA TGCGCTACTA CGGCACGTCG
GCCCCGCAAA CCCCCGAACC GGTGCTGAAC TGGCTGCGCC GCCACCAGGC CGAGGCCGGG
CGCGAGCACG AGCTTGAACC GCCGCGCCTG GCCATGGAAC TGGGCCCGCG CCGCCTGACG
TTCCGGCTGC ACCGGCACAC CGGGGACGCG GGAGGAGACG GTGAGGGCGC GAGCGACTGG
CTGATCGTGA TGCGCGAGAT CTCCGACGAT GCGGTGATCG AGGCCATGAG CCTGAGCTTC
AAGCTCACGG CCCGCGAGGC CGAGGTGCTC TACTGGGTGA TCAAGGGCAA GATCAACCGC
GACATCGCCG GCATTCTGGG TGCCAGTCCG GCCACGGTCA AAAAGCATCT GGAGCATGTG
TACGCCAAGC TGGGCGTGGA AACCCGCACG GCCGCCGCCG GCATGGCGCT GAACCGCATC
CGGCAGCTTC ATCCGCAGTT TGAGGCCTGA
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| Protein sequence | MSSVLDSTRA MDRKLDHTLD RANSDVVLIV DDVPDNLSVL HDALDESGYT VLVATSGEAA
LNRARQAVPD IVLLDAMMPG MDGFEVAKRL KAMAETAHIP IIFMTGLTET EHLVAALEAG
GVDYVTKPIK PKEVMARMGV HLQGARRARQ EARQAGQARN ALDAFGYASI TVRMGGPGDG
RLIWQTPLAR DLLMRYYGTS APQTPEPVLN WLRRHQAEAG REHELEPPRL AMELGPRRLT
FRLHRHTGDA GGDGEGASDW LIVMREISDD AVIEAMSLSF KLTAREAEVL YWVIKGKINR
DIAGILGASP ATVKKHLEHV YAKLGVETRT AAAGMALNRI RQLHPQFEA
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