| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1331 |
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| Symbol | |
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| ID | 4011977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1370920 |
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| End bp | 1372152 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637941010 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_548179 |
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| Protein GI | 91787227 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.466659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT ATTCTTTTGA GGCCATGCAG AACGACGGCA AGCTCCGCCG GGGGGTGATC
GAGGCTGACA CGGCCAAGGC AGCGCGCGGC CTGCTGCGCA CGCAGGCGCT GGTGCCACTG
GTTGTCGAGC CGGTGAGCGG CAGCGCTGGC CCGGGCATCC CCCGTTCGTT GCTGCAGACG
CCCTTGTTTG GCGGCCGCGT CTTCAATACC GCGAACCTGA CGATCTGGAC GCGCCAGCTC
GCCGGGCTGG TTTCGTCCGG CCTGCCGCTG GAGCGTGCGC TGACCGCGCT GACCGACGAA
GCCGAGGACG AGAAGCAGCG CAACCTGGTG GCCGCCCTGC GCGCCGAGGT GAACGGCGGG
GCGAGCTTTG CCCGGGCGCT GTCGCACCAC CCCGGCGAAT TCTCGGCGAT CTACATCGCC
GTCATCGGCG CGGGGGAGCA AACCGGCTAC CTGGGCCTGG TGCTTGAACG TCTGGCTGAC
GACCTGGAGG AGCGCCAGAC GCTCAAGGCC AAACTCATAG GCGCGGCGCT GTACCCGGCT
ATCGTGACGC TGGTGGCCAT CGTGATCGTG ATGTTCCTGG TCGGCTATGT GGTGCCGCAG
GTGGCCAGCG TCTTTGCGGG CACCAAGCGG GCGCTGCCTT TCCTTACCGT GGCCATGCTG
GCCATCAGCG GCTTTGTGCG CAGCTATGGA TGGGCGCTGC TGGGTGCTCT TGTTCTGATA
GTGACAAGTA TCCGTCTGGC CTTGAGAAAC GAAGGTTTCC GCGAGAAATT CGACGCCAGA
ACCCTGACCC TGCCGCTGGT CGGACGGCTC TCGCGTGACT ACAACGCGGC GCGCTTTGCC
AGCACGCTGG CCATGCTGGC TGGCGCGGGC GTGCCCATTC TCAAGGCCTT GCAGGCGGCT
GCCGAAACCC TGTCCAACCG TGCCATGCGC GCTGACGCGC TCGATGCCCT CCTGCTGGTG
CGCGAGGGTG CTCCACTGGC CTCGGCGCTG GCGCAGAAAA AACGCTTTCC CGGCCTGGTG
AGCATGTTTG CGCGCCTGGG CGAGCAGACG GGCCAGCTGC CCGTGATGCT GCAGCGCGCC
GCCCTGCAGC TGTCCAACGA AGTGCAGCGG CGCGCCATGG CACTGGCCAC CATTTTGGAG
CCGCTGCTCA TAGTGGCGAT GGGGCTGGTG GTGATGCTGA TCGTGCTGGC GGTGCTACTG
CCGATTATTC AGCTCAACCA GTTCGTGAAA TGA
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| Protein sequence | MPAYSFEAMQ NDGKLRRGVI EADTAKAARG LLRTQALVPL VVEPVSGSAG PGIPRSLLQT
PLFGGRVFNT ANLTIWTRQL AGLVSSGLPL ERALTALTDE AEDEKQRNLV AALRAEVNGG
ASFARALSHH PGEFSAIYIA VIGAGEQTGY LGLVLERLAD DLEERQTLKA KLIGAALYPA
IVTLVAIVIV MFLVGYVVPQ VASVFAGTKR ALPFLTVAML AISGFVRSYG WALLGALVLI
VTSIRLALRN EGFREKFDAR TLTLPLVGRL SRDYNAARFA STLAMLAGAG VPILKALQAA
AETLSNRAMR ADALDALLLV REGAPLASAL AQKKRFPGLV SMFARLGEQT GQLPVMLQRA
ALQLSNEVQR RAMALATILE PLLIVAMGLV VMLIVLAVLL PIIQLNQFVK
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