| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1294 |
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| Symbol | ipk |
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| ID | 4012188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1336334 |
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| End bp | 1337263 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637940972 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_548142 |
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| Protein GI | 91787190 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.214466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCA CTGCCAGCGC TCCTCGTTCC GTGGGTTCAG CACGCCCACT CAAAGCCATT
TACGACGTTC CCGCCCCGGC CAAGCTCAAC CTGTTTTTGC ACATCACGGG CCGGCGGGCC
GATGGCTACC ACCTGCTGCA GTCGGCCTTC ATGCTGATCG ACTGGTGCGA CACCCTGCAC
TTTGAACTGC GCACCGATGG GCAGATCAGC CGCGCCGACC TGAGCGATCC AGGCAGTCCC
GGCTGCGGCG CAGCAGAACC CCTGCCAGCA GAAGATCTTG CCGTGCGGGC GGCCAGGGCC
CTGCAGGCAG CGTGCGGCAC CTCACTGGGT GTTCACATCG GTCTGGAAAA ACGCATACCG
TCTCAGGCGG GCATGGGCGG CGGCTCGTCC GACGCGGCGA GCTGCCTGCT GGCACTGCAA
CGCCTCTGGG GCGTAACGTT GCCTGCCACG GAGTTGCGCG CGCTGGCCCT GTCGCTGGGC
GCGGACGTGC CTTTTTTCCT CTCGGGCGGG CATGCCTGGG TCGAAGGGAT CGGCGAGAAA
ATCACCCCCA TCGCGCTGCC GGCGGCGCGG TTTGTGGTGG TCAAGCCTTC GGCCGGGCTC
TCTACGCCCG CTATTTTCAG TGCGCCGGAA CTCAAACGCG ATACAGAAAC TGCTACAATC
CAAGGCTTTG CTGCAAATGC AGAAGGTCAG GTCTTCGGAT TTGGCCGCAA CGACTTGCAG
CCGGTCGCCC AGGCACTGTG TCCGCCGATT GGTCAATCAC TCGATTGGCT GTCAGCGCAA
CACCTTCAGG GACGAATGAC CGGCTCGGGA AGTGCTGTGT TTGCGCTACT GCCGCACGAT
GTGGATCTGT CAGATGTACC AGGAACTCCT GGTGACTGGA AAATCCGCAA GTGCAGCAAT
TTGCAAGCGC ATCCCCTGGC CGGTTGGTAA
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| Protein sequence | MTRTASAPRS VGSARPLKAI YDVPAPAKLN LFLHITGRRA DGYHLLQSAF MLIDWCDTLH
FELRTDGQIS RADLSDPGSP GCGAAEPLPA EDLAVRAARA LQAACGTSLG VHIGLEKRIP
SQAGMGGGSS DAASCLLALQ RLWGVTLPAT ELRALALSLG ADVPFFLSGG HAWVEGIGEK
ITPIALPAAR FVVVKPSAGL STPAIFSAPE LKRDTETATI QGFAANAEGQ VFGFGRNDLQ
PVAQALCPPI GQSLDWLSAQ HLQGRMTGSG SAVFALLPHD VDLSDVPGTP GDWKIRKCSN
LQAHPLAGW
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