| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1246 |
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| Symbol | |
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| ID | 4012294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1291679 |
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| End bp | 1293313 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637940924 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_548095 |
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| Protein GI | 91787143 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.871742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TTCTAGACCA TCACGACCAC GCGCATGATG ACCACGACCA CCATGCCCCG
ACGGGCTGGC GTCGTTGGGT ATTCGCGACC AACCACAAGG ACATTGGCAC GCTGTACCTG
CTGTTCAGTT TCTTCATGCT GATGTTTGGT GGCGTGCTGG CCCTGTTGAT TCGCGCTGAA
CTGTTCCAGC CCGGCCTGCA ACTGGTGAAC CCTGAACTGT TCAACCAGCT CACGACCATG
CACGGCCTGA TCATGGTGTT CGGCGCCATC ATGCCGGCCT TCGTGGGTTT CGCGAACTGG
ATGATTCCGC TGCAGATCGG TGCGGCCGAC ATGGCGTTTG CCCGCATGAA CAACTTCAGC
TTCTGGCTGA TGATTCCTGC CGGCCTGATG CTGGCCACCT CGTTTTTCAT GCCGGGCGGT
GCACCCGCTG CCGGCTGGAC GCTCTACGCG CCGCTGACGC TGCAGATGGG GCCGTCCATG
GATGCCGGTA TTTTTGCGAT GCACATTCTG GGCGCTTCGT CCATCATGGG CTCGATCAAC
ATCATCGTGA CCATCCTGAA CATGCGCGCA CCCGGCATGA CGCTGATGAA GATGCCGATG
TTCTGCTGGA CCTGGCTGAT CACCGCCTAC CTGCTGATCG CCGTGATGCC CGTGCTGGCC
GGCGCCATCA CCATGACGCT GACGGATCGC CACTTTGGCA CCAGCTTCTT CAACCCCGCC
GGCGGCGGTG ACCCGGTGAT GTACCAGCAT ATCTTCTGGT TCTTCGGCCA CCCCGAGGTG
TACATCATGA TTCTGCCGGC CTTCGGCATC ATCAGCCAGA TCATCCCCGC GTTCTCGCGC
AAGCGCTTGT TCGGCTACGC CTCGATGGTG TATGCCACCG GCTCCATCGC GATCCTGAGC
TTTGTCGTGT GGGCGCACCA CATGTTCACC ACCGGCATGC CCGTGACCGG CCAGCTGTTC
TTCATGTACT CGACCATGCT GATCGCGGTG CCCACCGGCG TGAAAGTGTT CAACTGGATT
GCCACCATGT GGAAGGGCTC GATGACGTTC GAGACGCCCA TGCTGTTTGC CGTCGGTTTC
ATCTTCGTGT TCACCATCGG TGGCCTGACG GGTGTGATTT TGTCGGTCGC GCCGATTGAC
ACCCAGCTGC AGGACACGTA CTACGTGGTG GCCCACTTCC ACTACGTGCT GGTGGCCGGT
TCGCTGTACG CCCTGTTTGC CGGTTACTAC TACTGGTCGC CCAAGTGGAC CGGCGTGATG
TACAACGAAA CCCGCGGCAA GATCCACTTC TGGTGGTCGC TGATTTCCTT TAACGTGACA
TTCTTCCCGA TGCACTTCCT GGGCCTTGCC GGCATGCCGC GCCGCTATGC CGACTACCCG
ATGCAGTTTG CCGACTTCAA CGCAATTGCC ACCGTGGGAG CCTTCTTCTT CGGTGTGGCA
CAGGTGTACT TCTTCCTGTT CATCGTGGTG CCCACGATGC GCGGCCAAGG CGCACCCGCC
AGGCAGAACC CCTGGGTTGA CGAGGGAGGC AAAGGCGCTG AAGGCCTGGA GTGGGAAGTC
CCGTCGCCAG CTCCTTTTCA CACCTTTGAA ACCCCTCCCA AGCTGGATGC CACGGCAACC
CGCGTGATTG GTTGA
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| Protein sequence | MSAVLDHHDH AHDDHDHHAP TGWRRWVFAT NHKDIGTLYL LFSFFMLMFG GVLALLIRAE
LFQPGLQLVN PELFNQLTTM HGLIMVFGAI MPAFVGFANW MIPLQIGAAD MAFARMNNFS
FWLMIPAGLM LATSFFMPGG APAAGWTLYA PLTLQMGPSM DAGIFAMHIL GASSIMGSIN
IIVTILNMRA PGMTLMKMPM FCWTWLITAY LLIAVMPVLA GAITMTLTDR HFGTSFFNPA
GGGDPVMYQH IFWFFGHPEV YIMILPAFGI ISQIIPAFSR KRLFGYASMV YATGSIAILS
FVVWAHHMFT TGMPVTGQLF FMYSTMLIAV PTGVKVFNWI ATMWKGSMTF ETPMLFAVGF
IFVFTIGGLT GVILSVAPID TQLQDTYYVV AHFHYVLVAG SLYALFAGYY YWSPKWTGVM
YNETRGKIHF WWSLISFNVT FFPMHFLGLA GMPRRYADYP MQFADFNAIA TVGAFFFGVA
QVYFFLFIVV PTMRGQGAPA RQNPWVDEGG KGAEGLEWEV PSPAPFHTFE TPPKLDATAT
RVIG
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