Gene Bpro_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1234 
Symbol 
ID4012282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1280090 
End bp1280845 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID637940912 
Producthypothetical protein 
Protein accessionYP_548083 
Protein GI91787131 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.95925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTCC CGCTGATCAC CGACCCGTTT TTCTACGTCG TGGCCGTCCC CGCGGTGCTG 
ATGCTGGGCA TCAGCAAAAG CGGTTTTGGC GCGGGCTTTG GATCTCTTGC GGTGCCGGTG
ATGGCGCTGG CCGTGACGGT ACCGCAGGCT GCCGCGATCC TGATGCCGGT GCTGTTGCTG
ATGGACCTGC TGGGCCTGGC GGCCTTTCAC AAGGATTTCG ACTTCAAGTT CCTGCGTTTC
CTGATTCCCT GTGGTCTGGT GGGTATCGTG GTGGGCGCGC TGCTCTTCAA GGCATTGGAC
GCCCGGATGG TGGCCGGCAT TGTGGGTGTG TTCACGCTGT TGTTTCTGGC GCAGCGCCTG
CTGTTTCCGC CCCGGCCCGA CAGCCCGCCG CCGCCCCGGT GGCTGGGAGC CATCCTGACG
GCAACCTCGG GCTTCACGAG TTTTGTGGCG CACGCTGGCG GGCCGCCGCT GAGCGCCTAT
GTGATTCCGA TGCGTCTGAG TCCGATCAAG TTCACCGCCA CCATGGCGGC CTTCTTCTTT
GTGATCAACC TCTCCAAATG GATTCCCTAT GGCTTGCTGG GTCTGCTCGA CTTGCGCAAC
ATGGCCACCT CGCTGGTGCT CTTGCCCCTG GCGCCGGTCG GTGTGTGGAT TGGTGTGCGT
CTGGCCAGGC GCATCAGTCC GGTTCTTTTT TACCGGCTGC TGTATGTCGG CATGTTGCTC
ACGGGCTGCA AGCTGGTCTG GGACGGATTG CGTTAG
 
Protein sequence
MSFPLITDPF FYVVAVPAVL MLGISKSGFG AGFGSLAVPV MALAVTVPQA AAILMPVLLL 
MDLLGLAAFH KDFDFKFLRF LIPCGLVGIV VGALLFKALD ARMVAGIVGV FTLLFLAQRL
LFPPRPDSPP PPRWLGAILT ATSGFTSFVA HAGGPPLSAY VIPMRLSPIK FTATMAAFFF
VINLSKWIPY GLLGLLDLRN MATSLVLLPL APVGVWIGVR LARRISPVLF YRLLYVGMLL
TGCKLVWDGL R