| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1186 |
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| Symbol | |
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| ID | 4012136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1225952 |
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| End bp | 1226677 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940863 |
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| Product | ABC transporter related |
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| Protein accession | YP_548035 |
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| Protein GI | 91787083 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.225539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGCCA GCATACCCGC CACCGTCGGC ATCCGGATTG ATGGGCTGAG CAAGCGCTAT
GGCACCGGCA CGACCGCCGT TGATGCGCTG AAGGACGTCA ACATGAGCGT GGCTCCCGGC
GAAGTGGTCG GGCTGATCGG CCCCAGCGGG TCGGGCAAGA CCACGCTGCT CAAGTGCCTG
GGGGCGATTA CGACGCCGAC GCGCGGCCGC ATGACGCTGG GCGGCGAAGT CATCTTTGAC
CAAGAATGGA AGATCACCGA CCTCACGGCA TTGCGGCGTG ATCGCATTGG TTTCGTCTTC
CAGTCCCCGT ACCTGATCCC GTTCCTCGAC GTCACTGACA ACGTCGCACT CCTGCCAATG
CTGGCGGGGC AGCCCGACGC GCAGGCGCGG GCGCGGGCCA TGGAGCTGTT GCAGGGACTC
GATGTCGCGC ATCGCGCGAA GGCCCTGCCG TCAGAACTCT CCGGCGGCGA GCAGCAGCGG
GTATCCATTG CCCGCGCCCT GGCTAACCGC CCGCCGGTGA TCCTGGCCGA CGAACCCACC
GCACCACTGG ACAGTGAACG GGCCCTGGCG GTGATGCGCA TCCTCAACCA GATGGCGGCG
CAGTATCAGA CCGCCATCAT CGTCGTTACG CACGACGAAA AGATCATTCC CACCTTCAAG
CGCATTTACA ACATCCGCGA CGGGCGGACG GTTGAGGAGG CGGGGCAGGG GCGTGCGCTT
CAGTAG
|
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| Protein sequence | MAASIPATVG IRIDGLSKRY GTGTTAVDAL KDVNMSVAPG EVVGLIGPSG SGKTTLLKCL
GAITTPTRGR MTLGGEVIFD QEWKITDLTA LRRDRIGFVF QSPYLIPFLD VTDNVALLPM
LAGQPDAQAR ARAMELLQGL DVAHRAKALP SELSGGEQQR VSIARALANR PPVILADEPT
APLDSERALA VMRILNQMAA QYQTAIIVVT HDEKIIPTFK RIYNIRDGRT VEEAGQGRAL
Q
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