Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1120 |
Symbol | |
ID | 4011818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1157199 |
End bp | 1158542 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637940797 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_547970 |
Protein GI | 91787018 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAA AAGTTTTTAT CAAAACCTTC GGGTGCCAGA TGAACGAGTA CGACTCGGAC AAGATGTCCG ACGTACTGCA TGCGGCAGAG GGCTACGAGC CCACCCAGAA TGTCGACGAA GCCGACCTGA TCCTGTTCAA CACCTGCTCG GTGCGTGAAA AGGCGCAGGA AAAAGTCTTC AGTGACCTGG GCCGCGTCAA GCACCTGAAG GAAAAAGGCG TGCTCATCGG CGTGGGCGGT TGCGTGGCCA GCCAGGAAGG CGCGGCCATC ATCCAGCGCG CGCCTTATGT TGACGTGGTG TTCGGTCCCC AGACGCTGCA TCGCCTGCCG GACCTGCTGG CCAAACGCGC GCGACTGAAC AAACCCCAGG TCGACATCAG CTTTCCCGAA ATCGAGAAGT TCGATCACCT GCCGCCGGCC CGCGTGGAAG GTGCCAGCGC CTTTGTCAGC ATCATGGAGG GCTGCTCCAA GTACTGCAGC TACTGCGTCG TGCCGTACAC GCGCGGCGAA GAGGTCTCTC GGCCGTTTGA CGACGTGCTG GTCGAAGTGG CCGGCCTAGC CGACCAGGGT GTGAAAGAAG TGACGCTGCT GGGGCAAAAC GTCAACGCCT ACCGCGGCCC CATGGGTGAC ACGGCCGAGA TCGCCGATTT CGCCACGCTG CTCGAATACG TGTCTGACAT CCCCGGCATC GAGCGCATCC GCTACGTCAC CAGCCACCCC AACGAGTTCA CGCAAAGCCT GATCGACGCC TATGCCCGGC TGCCCAAGCT GGTCAACCAC CTGCACCTGC CGGTGCAGCA CGGCTCGGAC CGGATACTGA TGGCCATGAA GCGCGGCTAC ACCGCGATGG AATACAAAAG CACCATCCGC AAGCTGCGAG CCATCCGCCC GGACCTGGCG ATGAGCAGCG ATTTCATTGT GGGCTTTCCT GGCGAAACCG AAGACGACTT CAACAAGATG ATGAAGCTGA TCGACGATGT TGGCTACGAC ACCTCCTTCA GTTTCATCTA CAGCCCGCGG CCGGGCACGC CCGCGGCCGC CCTGCACGAC GATACGCCGC ACGAGGTCAA GCTCAGGCGC CTGCAGCATT TGCAGGCCAC GATTGACGAC AGCGTGCGCG CCATCAGCGC CAGTCGCCTG GGCACGGTGC AGCGCATCCT GGTGGAAGGC GCGTCGCGCA AGGACCCGAC CGAGCTGATG GGCCGCACCG AGTGCAACCG GGTGGTCAAT TTCAAGGGCC AGCCGCGGCT GATCGGCCAG ATGGTCGACA TCACCATCAC ACAGGCGACA CAGCGCTCGC TGCGCGGCGA AGTCCTGACG CGGGACGTCG CCGTGCAGGC CTGA
|
Protein sequence | MSKKVFIKTF GCQMNEYDSD KMSDVLHAAE GYEPTQNVDE ADLILFNTCS VREKAQEKVF SDLGRVKHLK EKGVLIGVGG CVASQEGAAI IQRAPYVDVV FGPQTLHRLP DLLAKRARLN KPQVDISFPE IEKFDHLPPA RVEGASAFVS IMEGCSKYCS YCVVPYTRGE EVSRPFDDVL VEVAGLADQG VKEVTLLGQN VNAYRGPMGD TAEIADFATL LEYVSDIPGI ERIRYVTSHP NEFTQSLIDA YARLPKLVNH LHLPVQHGSD RILMAMKRGY TAMEYKSTIR KLRAIRPDLA MSSDFIVGFP GETEDDFNKM MKLIDDVGYD TSFSFIYSPR PGTPAAALHD DTPHEVKLRR LQHLQATIDD SVRAISASRL GTVQRILVEG ASRKDPTELM GRTECNRVVN FKGQPRLIGQ MVDITITQAT QRSLRGEVLT RDVAVQA
|
| |