| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1077 |
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| Symbol | ddl |
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| ID | 4012084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1110286 |
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| End bp | 1111302 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940754 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_547927 |
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| Protein GI | 91786975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0742794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.822876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAGCA ACGCAGACAC ATCCCAGGCC GTGAGCGCCG GGACAAGCGT GGGGGCCACG
TTTGGCAAGG TCGCCGTCCT CATGGGGGGC ATGTCGGCCG AGCGCGAGAT CTCCCTGATG
TCGGGCCGGG GCGTGTTGCA GGCGCTGCGT TCCCGCGGCG TGGATGCCCA TGCGTTTGAC
CCGGCCGAGC GCGACATCAG CGAGCTGAAA AAGGACGAGT TTGCGCGCTG CTTCATCGCG
CTGCATGGCC GGTTCGGTGA AGACGGCACG GTGCAGGGCG CGCTGGAGTT GCTGGGCATA
CCCTACACCG GCTCCGGCGT CATGGCGTCC AGCATGGCCA TTGACAAGGT GATGACCAAG
CGGGTCATGC TCGCCGAAGG CCTGCCGACC CCCACCTATG TGCTGTTGCG CCGGGGCAGC
TATGGCAGCG CCGACGTGAG CGCCGTCCCT GACAAGCTGG GCTTGCCGCT GATTGTCAAG
CCCGCACGGG AAGGCTCATC GATCGGGCTG ACCAAGGTGA CCGAGCGGGC CGGCATGGCA
GATGCGGTGG CGCAGGCCGA AAAGCTGGAT GCCGACATCC TGTGCGAGCA GTTCATCAGT
GGCGACGAGG TGACCTGCCC GGTACTGGGA ACCGGCAGCG AGGCGCGCGC CCTGCCGGTC
ATCCGCATCG TGGCGCCCGA CGGCAATTAC GACTACCAGA ACAAGTACTT CACCGACACC
ACGCAGTACC TGGTGCCCTG TGGCCTGCCT GAAGGCGAAG AGGCCGTCAT CCAGCAGCTG
GTCCTGCAGG CTTACCGCAC GCTCAACTGC CGCGGCTGGG CACGCGCCGA CGTGATGATC
GACAAAGTCA CGCGCAAGCC CTACCTGCTT GAAATCAATA CCTCGCCCGG CATGACCGGG
CACTCGCTGG TGCCCATGTC TGCACGGGCG GCCGGCATTT CCTATGAAGA CCTGTGCATC
GAGGTGCTGA AGACCACCGC ACTCGACCAT CAGTCGCAAG GGGGAGGCGC TTCTTGA
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| Protein sequence | MSSNADTSQA VSAGTSVGAT FGKVAVLMGG MSAEREISLM SGRGVLQALR SRGVDAHAFD
PAERDISELK KDEFARCFIA LHGRFGEDGT VQGALELLGI PYTGSGVMAS SMAIDKVMTK
RVMLAEGLPT PTYVLLRRGS YGSADVSAVP DKLGLPLIVK PAREGSSIGL TKVTERAGMA
DAVAQAEKLD ADILCEQFIS GDEVTCPVLG TGSEARALPV IRIVAPDGNY DYQNKYFTDT
TQYLVPCGLP EGEEAVIQQL VLQAYRTLNC RGWARADVMI DKVTRKPYLL EINTSPGMTG
HSLVPMSARA AGISYEDLCI EVLKTTALDH QSQGGGAS
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