| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1060 |
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| Symbol | |
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| ID | 4012047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1087296 |
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| End bp | 1088372 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637940737 |
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| Product | phage integrase |
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| Protein accession | YP_547910 |
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| Protein GI | 91786958 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.219086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.572085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC GGCCGCCAAT TGCGTCCGGA GTTCCTGAAG ACAGACCGGC GTCCGTGCCC
GAATCGCACC CGTTGGTGGA GCGTTACCTG GAGCATGTGC GCGTTGAAAA ACGCCTGGCG
TCGCGCACGG TGGAGCTGTA CGCGCTGGAC CTGCACAAGC TGGAGGCCAA CGCCCGCCAG
GCCGGCGTCG CGCTGACCGA GGTGCACAGC ACCCACATGC GGCGTTGGGT CGCGCAGATG
CATGGCGCCG GGCGCAGCGG CCGCGGGATC GCACTTATTT TGTCGGGCTG GCGCGGCTTT
TACGCCTGGC TGGGCCGTGA AGGCCTGGTG CCCGCCAACC CGGTGCAGGA CGTGCGCTCG
CCCAAGGTCG CCAAGCCCCT GCCAAAGGCC CTGAGCGTGG ACGAGGCGGT GCAGCTGGCC
AGCTACCAGT CGGATGACGA GGATGATCCG CACCTGGAAG CGCGTGACCA GTGCATCACG
GAGTTGCTCT ATGGCTGCGG GCTGCGCATT GGCGAACTGG TGGGGCTGGA TGTGCGCGCC
AGCGCGCAGG CGCGCGGCTG GGTGGACATG GATGCCGCCG AGGCCCATGT GCTTGGCAAG
GGCTCGAAGC GGCGCAGCGT GCCGGTCGGC CGCCAGGCAC TGCAGGCGCT GCATGCCTGG
CTCGCCCTGC GCGGTGACTG GGCCGGCGAG GGCGCGGCCG CCGAAGGGGC AGCCGGCCAG
GCGCTTTTCA TCAGTCAGCG CGGCGCGCGG CTCACGCCCC AGCACATCCG CCTGCGCCTG
AAGCGGCGTT CACTCAAGGC CGGGCTGGCC ACCCCGGTGC ATCCGCACAT GCTGCGCCAT
TCGTTTGCCA GTCATGTGCT GCAGTCCAGC GGTGATCTGC GCGCGGTGCA GGAGCTGCTG
GGCCACGCCA ACATCACGAC GACGCAGGTT TACACGCGGC TTGATTTTCA GCATCTGGCC
AAGGTGTATG ACGCCGCCCA TCCGCGCGCT ACATCGGCCG GCGTGGCTTC GCGGGCTGTC
CCGCTGCCCG CAACAGCTCC CGCCCCGGCG GTGGTGAAGG TCAAGTCCAA ACCGTGA
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| Protein sequence | MTQRPPIASG VPEDRPASVP ESHPLVERYL EHVRVEKRLA SRTVELYALD LHKLEANARQ
AGVALTEVHS THMRRWVAQM HGAGRSGRGI ALILSGWRGF YAWLGREGLV PANPVQDVRS
PKVAKPLPKA LSVDEAVQLA SYQSDDEDDP HLEARDQCIT ELLYGCGLRI GELVGLDVRA
SAQARGWVDM DAAEAHVLGK GSKRRSVPVG RQALQALHAW LALRGDWAGE GAAAEGAAGQ
ALFISQRGAR LTPQHIRLRL KRRSLKAGLA TPVHPHMLRH SFASHVLQSS GDLRAVQELL
GHANITTTQV YTRLDFQHLA KVYDAAHPRA TSAGVASRAV PLPATAPAPA VVKVKSKP
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