Gene Bpro_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1057 
Symbol 
ID4012044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1084572 
End bp1085117 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content65% 
IMG OID637940734 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_547907 
Protein GI91786955 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.506281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC CCGAATGGAG CCCCAGCCTC AAGGCCCAAC CGCAGGATCT GGTGGACGCC 
ATCCTGGCGC GCCGGGGCGG CACCATGATC AACCTCGACA AGGCGCTGCT GTGGAGCGAG
CCGCTGGCGC GGGCCTGGAA CATCTACCTG GGCGCGGTGC GCACCGGGCT GCCAACCAGC
CGCAAGCTGC GCGAACTGGG CATTTGCACC GTGGCACTGC TGACCGGCGC CGACTACGAA
TACCGTCACC ATGCACCGGA CTTCCTGGCC GCCGGTGGCA GCCAGTCCGA GCTGGATGCA
CTCCAGGCCC TGGTCAAAAG CGATGCGCGC CAAACCACGG CGCATCCGGC GCTGGGTGCG
GTGGAGCAGT TGTTGATTCA ATACGCCGCG CAAATGACGC TGGACGTCAA GGTCAGCGAC
CAGGTGTTCG CGGCACTGCG CGAGCATTTT GACAACACGG AACTGGTCGA ACTGACCAGC
GCGATTGCCA CCTACAACAT GGTGGCGCGT TTTCTGGTGG CGCTGGGCGT ATCGCCGGAG
GAATGA
 
Protein sequence
MRIPEWSPSL KAQPQDLVDA ILARRGGTMI NLDKALLWSE PLARAWNIYL GAVRTGLPTS 
RKLRELGICT VALLTGADYE YRHHAPDFLA AGGSQSELDA LQALVKSDAR QTTAHPALGA
VEQLLIQYAA QMTLDVKVSD QVFAALREHF DNTELVELTS AIATYNMVAR FLVALGVSPE
E