| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1039 |
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| Symbol | |
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| ID | 4012257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1065517 |
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| End bp | 1066185 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637940717 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_547890 |
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| Protein GI | 91786938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.549744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0386437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG ATTTTTCTCC CATCTGGTCC GGCTGGCCCC AGCTGTTGCG TGGTGCGCTG
GTGACCGTGG AAATCACGGC GGCCTCGCTG CTGCTGGGTT GCGTCATGGG GCTGCTGGTC
GGTATCGGCC GGCTCAACCC CAGGCGGCGC ATTGTCTATG GCCTGTGCAC GGCCTATGTG
GCGATCATCC GCGGCACGCC GCTGCTGGTG CAGTTGTTCA TTCTGTTCTT TGGCCTGCCG
CAGTTCGGCA TCCTGCTGCC GGCTTTTGTA TGCGGCGTGA TTGGCCTGGG CATCTACTCC
GGAGCCTATG TTTCGGAGGT CGTGCGTGGC GCCATCCAGT CCATTGACCG CGGCCAGATG
GAGGCTGCCC GCTCCATCGG CATGTCGTCG GGGCTGGCGA TGCGCGCCGT GGTGCTGCCC
CAGGCCGTGG TGCGCATGAT TCCGCCGCTG GGCAATGAAT TCATTGCCCT CATCAAGAAC
TCGGCCCTGG TGTCGCTGCT GACCATCCAT GACGTCATGC ACGAAGGGCA AAAAATCATC
AGCGTGTCCT ATCGTTCACT GGAGGTGTAC CTGGCCATCG CCGTGGTGTA TTTCGTACTG
ACCGGTGCAA CCACTCTGGT GTTGCGCCGC ATGGAGTTGC GCCTGCGCGC AGGAGGGATG
GTGCAATGA
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| Protein sequence | MELDFSPIWS GWPQLLRGAL VTVEITAASL LLGCVMGLLV GIGRLNPRRR IVYGLCTAYV
AIIRGTPLLV QLFILFFGLP QFGILLPAFV CGVIGLGIYS GAYVSEVVRG AIQSIDRGQM
EAARSIGMSS GLAMRAVVLP QAVVRMIPPL GNEFIALIKN SALVSLLTIH DVMHEGQKII
SVSYRSLEVY LAIAVVYFVL TGATTLVLRR MELRLRAGGM VQ
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