| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1020 |
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| Symbol | |
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| ID | 4012141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1044697 |
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| End bp | 1046916 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637940698 |
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| Product | Type I secretion system ATPase, HlyB |
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| Protein accession | YP_547871 |
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| Protein GI | 91786919 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.543638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAATCCG TCACCTCACC TCAAAAAACC AATTCGTCAG AGCCCGGCCA ACTCACTGCT
GCCGACGCAA TATCCACAGC CTCCTTATCG GATTTATATG GACTGATCGC ATCCTTCTTG
CATCTGGTGG GCGCTAGCGC TGATGTGGCA CGCCTGGCCG AGCACCACGC CTGGCCGGCC
GAAGGTCCCG ACAGCGCGAC TCTGGTTCAG TCCTTGCAGG GATTGGCACT GGAGGTCAAA
CATCACCAGA CCTCGTTCAA TAAACTCATT CGCGGGTCCT TGCCCGCGCT CGCACGCGGA
CCGGATGGGC ATTGGCTACT CATAGGCCAT GCCAGCAAAG ACTGTGTGGT GGTACAAGCC
AGCGGCGCCG CACAGCCGCG ACAGCTTTCC TGGGCTCAGT TTGCCCAGCA GATGGCCCCG
CAAACCCGGC TGGAATGGAT CACGGCGCGC CCACAAGCCG TGGCGATGGA CAACGGAACT
CCTGATCCAA ATTTCGGGGT CGGCTGGTTC TGGACCTCAC TCAGCCAGTA CAAACGTGTG
CTCGGTGAGG TCTTGCTTGC CTCCTTCTTT GTGCAGATAT TCGCGCTGCT CACACCGCTG
ATTTTTCAGG TGGTGATAGA CAAGGTGCTG ACGCACCGTT CGATGACAAC GCTGGATGTG
ATGGTGGTTG CCCTGCTGGG AGTAGGGCTC TTCGAGGTGA TGCTGGGTGC CATGCGGCAT
TACCTCTTTA CCCACACCAC CAACCGTGTG GATGTGGAGC TGGGGGCCAA GCTGTTTCGC
CACCTGTTGC ATCTGCCCCT GTCTTACTTC GAGTCACGGC GCAGTGGCGA TACGGTGGCC
CGGGTGCGCG AACTGGAGAA CGCACGCAAC TTCATGACGG GCAGCGCCCT GACCAGTTGG
CTGGACCTGT TCTTTGCCGT TGTTTTCCTT GGCGTGATGT TTTATTACAG CGTGACGCTC
ACCCTGATCG TGGTTGGCTC CCTGCCGGTG TTCTTCGCTG CGTCCTGGCT CATAACGCCG
CTGATGCGAA AGAAGCTTGA AGACAAGTTC GCGCTGGGCG CCGAGAACCA GACCTTTCTT
GTGGAAACCG TCACCTCCAT GGAAACGCTC AAGAGTCATG CGGTGGAAGG TGCGTGGCAA
CGGGATTGGG AGCGGCGCCT GTGCGACTAT GTGACGGCCG CCTTCGAATC GGGTCATCTG
GGAAACGCCA CCAACCAGTT TATCGGCCTG GCGAGCAAGG TGTTGACGGT ATTGTTGCTG
TACTTTGGCG CCAGGCTGGT CATCGACGGC GACCTGACAG TGGGCGGCCT GATCGCCTTC
AACATGCTGT CGGGTCGTGT CAATGCACCG ATCCTGAAGC TCGCCTCGCT GTGGCAGGAC
TTTACGCAGA TGAAGGTCAG CATCAAGCGC CTGGCCGACA TCATGAATGC GACCCCCGAA
CCCGTATTCC GGCCCGGACG CAGCACACCG CCTGCACTGG AAGGCCGCGT GACATTCGAG
CATGTCTCGT TTCGCTATGC CCAGAGCGCT CCCGAGGTGC TCTGCGACGT GAGCGTGGAC
ATCTGTCCCG GCGAGATCGT GGGAATTACC GGCATTTCCG GCGCGGGCAA GACCACCTTC
ATGCGGTTGA TGCAGCGATT GTATCTTCCG GAGAAGGGCC GTGTTTTGCT TGATGGCATG
GACTTGAGTG TGGTGGACAC CGCCTGGTTG CGCCGGCAGA TTGGCGTGGT CGGGCAGGAC
ACGGCCCTGT TCAACCGCTC GGTGCGTGAA AACATCGCCC TGGGCAATCC GGCGATCGCC
ATGGACTCCG TGATGGAAAG CGCGCGACTG GCTGGTGCGC ACGAATTCAT CCTGCAACTG
CCTGAGGGTT ATGACACGGT GATTGGCGAG CGGGGCAGCA AACTCTCGGG CGGGCAGCGC
TCGCGCATTG CGATTGCGCG GGCGCTGGTG AACAACCCGC AAATCCTGTT ATTCGACGAA
GCCACCGCCG CTCTGGACTA CGAAAGCGAG CGGGTGATTC ACGACAACAT GGCCCGGATC
TGCGAAGGAC GCACCGTGTT CATTGTGGCG CACCGGCTGT CCACCTTGCG GATGGCTCAC
CGCATCCTGG TGCTGGATCG TGGCCGTTTG ACGGAGACCG GCAACCATCG CGAACTCATG
AACATTAATG GCCGCTACGC CTCGTTGTAC CAGGCGCATC AGGTGCTGGA GGCTGCATGA
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| Protein sequence | MQSVTSPQKT NSSEPGQLTA ADAISTASLS DLYGLIASFL HLVGASADVA RLAEHHAWPA
EGPDSATLVQ SLQGLALEVK HHQTSFNKLI RGSLPALARG PDGHWLLIGH ASKDCVVVQA
SGAAQPRQLS WAQFAQQMAP QTRLEWITAR PQAVAMDNGT PDPNFGVGWF WTSLSQYKRV
LGEVLLASFF VQIFALLTPL IFQVVIDKVL THRSMTTLDV MVVALLGVGL FEVMLGAMRH
YLFTHTTNRV DVELGAKLFR HLLHLPLSYF ESRRSGDTVA RVRELENARN FMTGSALTSW
LDLFFAVVFL GVMFYYSVTL TLIVVGSLPV FFAASWLITP LMRKKLEDKF ALGAENQTFL
VETVTSMETL KSHAVEGAWQ RDWERRLCDY VTAAFESGHL GNATNQFIGL ASKVLTVLLL
YFGARLVIDG DLTVGGLIAF NMLSGRVNAP ILKLASLWQD FTQMKVSIKR LADIMNATPE
PVFRPGRSTP PALEGRVTFE HVSFRYAQSA PEVLCDVSVD ICPGEIVGIT GISGAGKTTF
MRLMQRLYLP EKGRVLLDGM DLSVVDTAWL RRQIGVVGQD TALFNRSVRE NIALGNPAIA
MDSVMESARL AGAHEFILQL PEGYDTVIGE RGSKLSGGQR SRIAIARALV NNPQILLFDE
ATAALDYESE RVIHDNMARI CEGRTVFIVA HRLSTLRMAH RILVLDRGRL TETGNHRELM
NINGRYASLY QAHQVLEAA
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