| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0993 |
|---|
| Symbol | |
|---|
| ID | 4010937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1009507 |
|---|
| End bp | 1010559 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637940672 |
|---|
| Product | Rieske (2Fe-2S) region |
|---|
| Protein accession | YP_547845 |
|---|
| Protein GI | 91786893 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000318811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTGCT GGGGCAACGA AGTCAAGTCC GGTGAGATGT TTCATCGCAA ACTGCTCAAT
GAAATGGTGG TCTTTTACCG CAAGGAAGAC GGTACGGCCG TCGCGTTGCA AGACCGTTGT
CCGCATCGCT TCATTCCGCT TCACCTGGGG AAAATCGTCG GGGATTCCAT CGAATGTGCC
TACCACGGCC TTACCTTCGA CTGTTCGGGC AAGTGCGTGA AGAACCCGCA CGGCGATGGC
AAGGTGCCAG CGGCAGCCAG GGTGCGCTCT TACCCGGTGG CCGAAAAGCA CGGCATGCTG
TGGATCTGGA TGGGCAGCCA GGCCGCGGAT CCCGTGACCA TTCCCGACTA CAGCGTGCTC
GAGTCCGAAG CTGGCTTTGC CACCAGCCGT GGCTACCTCC ACATCGAGGC CAACTACGAG
CTGATGGGCG AAAACCTGCT TGACCTGAGC CACATCACCT ATCTGCATGA CGGCTATCTC
GGCAGCCCCG AACAGGTTGG CGCAGACCAG GTGCTCAAGG AGGAGGGCGG CAAGATCCAT
TGCGACCGCT GGATGCCCAA CATTTCGGTC CCCCCCATCT TCGACATGGT GTATCGCCGC
GACGGCAAGC CGGTGGACAT GTGGACCCAC ATGACCTGGA TTCCGCCAAG CTGCTTTCTG
TTGGACTCCG GCGTGCATGA AGTGGGCGGC AAGCGCGAGG ACCACGGCTG GTATTACGGC
GTGCACATCC TCACGCCCGA GTCGGAGAAA ACGGTGCACT ACCACTTCGC TGCCGCGATG
CCTCCGGGCA CCAGGATGAC GCCCGATGAG ACCGCGAAGT TTTCCGCCTT GCGCCGTCAC
GCATTTGAGG CCCAGGACAA ACCCATCATC AACGCACAAC AGGCGGCCAT TGGCGACAAC
GACTTCTGGG AGATGAAGCC GGTGCTGTTG AGCGTGGATG CGGGCCCGGT GCGCATGCGC
CGGGCCATCG AACGCATGAC CAAAGAGGAC GCCGCCATCG AGACACCAGC GGTGCCCATC
AAGGTGGTTC GAGCCGCACC CGCGAGCGTT TGA
|
|---|
| Protein sequence | MACWGNEVKS GEMFHRKLLN EMVVFYRKED GTAVALQDRC PHRFIPLHLG KIVGDSIECA
YHGLTFDCSG KCVKNPHGDG KVPAAARVRS YPVAEKHGML WIWMGSQAAD PVTIPDYSVL
ESEAGFATSR GYLHIEANYE LMGENLLDLS HITYLHDGYL GSPEQVGADQ VLKEEGGKIH
CDRWMPNISV PPIFDMVYRR DGKPVDMWTH MTWIPPSCFL LDSGVHEVGG KREDHGWYYG
VHILTPESEK TVHYHFAAAM PPGTRMTPDE TAKFSALRRH AFEAQDKPII NAQQAAIGDN
DFWEMKPVLL SVDAGPVRMR RAIERMTKED AAIETPAVPI KVVRAAPASV
|
|---|
| |