Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0988 |
Symbol | |
ID | 4010932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1005447 |
End bp | 1006496 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637940667 |
Product | inner-membrane translocator |
Protein accession | YP_547840 |
Protein GI | 91786888 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000237918 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCGATGA CTCCCCTTAT TTCACGGCCC AGCGCCTGGG TTCCCCTGCT GGCGCTGCTG CTGCTGGCGA CCGTTCCCTT TGTGGCGCAG GCCACCGACC AGCAGTTTTA TGTCGCGTTT TTTGCGCGCA TCATCATCTA CGCGATTGCG GCCTGCGCGC TGAACATCGC GCTGGGTTAC GGCGGGCTGG TGAGCTTCGG CCATTCACTG TTCCTCGGAC TGGGCGGCTA TGCCGTCGGC CTGGCATCTT TTTATGGGGT CGGCAACGGC TGGGTGCACC TGGCGTTGAC CCTCGGCGTG TGCGGCCTGG TGGCGCTGGT CACCGGCGCC ATCAGCCTGC GCACCACCGG CATCGCCTTC ATCATGATCA CGCTGGCCTT CGCGCAGATG GGTTACTTTC TCTTCGTCAG CCTGAAGCAC TACGGCGGCG ATGACGGCAT GCCCATCGCG CAGACCAGCC GCTTCGGCCC GCTCGACCTG TCGTCCGCGA CCAATGTGTA CGTCGTCGCC TTCGTCGTGC TGGTGCTGTC GATCTGGTGG CTCGCCAGGC TGCGCGTCGC GCCCTTCGGC ATGGTGATCC GCGGCGCCAA ACAGAACGCA CGCCGGGTCA ACGCCGCCGG CATCCCGGTG CTGCGTTACC AGTTGCTGGC CTATGTGATG TCGGGCATGT TGTGTGGCGT GGCCGGTCTG CTGCTGGCCA ACCTCAATGC CTTCGCCTCG CCCAGCACCC TGGCCTGGGC TGTTTCCGGC GAGCTGATCG TCATCGTCGT CATCGGCGGT CTGGGCACGG TGTTCGGTCC CTTGATGGGG GCGCTGGTCT TCCTGGGTCT CGAAGAGATC CTGAAAGGCT TCACCGATCA CTGGATGGTC ATCTTCGGCC CGCTCATTGT CATCGTCGCC CTCCTGGGCA AGCGCGGCAT CATCGGCCTG CTGCAGCGTT TTGACTCGCG GGGAAAGCTG CCCGCCAAAA TAACCACCAC CACCACCACC ACCGCAGCGG CTGTGGCGGC GACGGGTGTG GCGACTGGTG TGGCGAAGGG AGCCCTGTGA
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Protein sequence | MAMTPLISRP SAWVPLLALL LLATVPFVAQ ATDQQFYVAF FARIIIYAIA ACALNIALGY GGLVSFGHSL FLGLGGYAVG LASFYGVGNG WVHLALTLGV CGLVALVTGA ISLRTTGIAF IMITLAFAQM GYFLFVSLKH YGGDDGMPIA QTSRFGPLDL SSATNVYVVA FVVLVLSIWW LARLRVAPFG MVIRGAKQNA RRVNAAGIPV LRYQLLAYVM SGMLCGVAGL LLANLNAFAS PSTLAWAVSG ELIVIVVIGG LGTVFGPLMG ALVFLGLEEI LKGFTDHWMV IFGPLIVIVA LLGKRGIIGL LQRFDSRGKL PAKITTTTTT TAAAVAATGV ATGVAKGAL
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