Gene Bpro_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0978 
Symbol 
ID4011734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp996134 
End bp997030 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID637940657 
ProductLysR family transcriptional regulator 
Protein accessionYP_547830 
Protein GI91786878 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00024266 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACAC CCGATTTCAA CTTGCTGGTC ACCCTTGATG TGCTGCTCGC GGAAGGCAGC 
GTTGTGCGCG CGGCCCGGCG CTTGCGGCTC AGCCCGTCGG CGATGAGCCG GGCGCTGGCG
AGGTTGCGCG AGACGACGGG CGATCCGCTG CTGGTCAGGG CCGGGCGCGG CCTCGTCCCC
ACACCCCGGG CGATAGCACT GCGCGAGCAG GTCGGCCAGC TCGTGCAGGA CGCGGAAGCG
GTTCTGCGCC CCGTGGAGAA GCTCAAGCTC AAAAAGCTGG TCCGAACCTT CACGCTGCGG
ACCCGCGAAG GCTTTGTGGA GAACTTCGGG CCGGCGCTCA TTGCCCGCGT CGGCCAGGAG
GCGCCCGGCG TGCGGCTGTG CTTCGTGCAG AAGCTGGACA AAGACAGCAC GCCGCTGCGC
GACGGGACCG TCGACCTGGA AACCGGCGTG GTGGGCAGGG CGACGGCTCC TGAGCTGCGC
GTGCAGGCCT TGTTCCGGGA CCGCTTCATT GGCGTCGTGC GAGCGGGGCA CCCGCTGAGC
CAGGGCGAGA TCACGCCGGC CCGTTATGCG GCCAGCAGGC ACATCGGCGT CTCGCGGCGG
GGTCTGGGCG CGGAGCCGGT GGATGAAGCC TTGGTGCCGC TCGGGCTGCA AAGGGAAATC
GCCACCATCG TCGGCGGTTT TTCGGCCGCG CTGGCGCTGG CCCGGGCCTC AGACCTGATC
GCCACTGTTC CCGAACGGCA TACCGGAAAC CTGCGCGCCG GTATGCACAG TTTTCCCCTT
CCGGTCGCCA CGCCGGAGAT CACGGTGTCA TTGCTCTGGC ACCCACGGCT GGATGCCGAT
CCGGCGCATC GCTGGCTGCG CGGGTGTGTT CGGGACGCCT GCGCGGACAT CCGCTGA
 
Protein sequence
MATPDFNLLV TLDVLLAEGS VVRAARRLRL SPSAMSRALA RLRETTGDPL LVRAGRGLVP 
TPRAIALREQ VGQLVQDAEA VLRPVEKLKL KKLVRTFTLR TREGFVENFG PALIARVGQE
APGVRLCFVQ KLDKDSTPLR DGTVDLETGV VGRATAPELR VQALFRDRFI GVVRAGHPLS
QGEITPARYA ASRHIGVSRR GLGAEPVDEA LVPLGLQREI ATIVGGFSAA LALARASDLI
ATVPERHTGN LRAGMHSFPL PVATPEITVS LLWHPRLDAD PAHRWLRGCV RDACADIR