Gene Bpro_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0951 
SymbolispH 
ID4011085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp973754 
End bp974755 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID637940631 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_547805 
Protein GI91786853 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.340547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG CAGACAAACG GCTTGACGAA ATCCTGCTCG CGGAGCCGCG CGGCTTTTGC 
GCCGGTGTCG ACCGGGCCAT TGAAATCGTC GAGCGGGCGC TCACCAAGTT TGGCGCACCG
ATCTACGTGC GCCACGAAAT CGTGCACAAC ACCTATGTGG TCAACGAGCT CAAGGCCAAG
GGCGCGATCT TTATCGAAGA GCTGTCCGAC GTGCCGCCGG GCGCCACGCT GGTGTTCAGC
GCCCATGGCG TGAGCAAGGC CATCCAGGAC GAGGCGCGCG CCCGCGGCTT CCAGATTTTT
GATGCCACCT GCCCGCTGGT GACCAAGGTG CACGTCGAAG TGGCCAAGCT GCACAAGGAA
GGTTACGAGT TCATCATGAT CGGCCACAAG GGCCACCCCG AGGTGGAGGG CACCATGGGC
CAGCTCGACA GCGGCATCCA CCTGGTGGAA GACGTGGCCG ACGTGGCACG CATTACGCCC
TCGCAAACCG AGCGGCTGGC CGTGGTGACG CAAACCACGC TGAGCGTGGA TGACGCGGCC
GAGATCAGCG CGGCCGTGAA GGCGCGCTTT CCGCAGGTGC GCGAGCCCAA GCAGCAGGAC
ATTTGCTACG CCACGCAAAA CCGGCAGGAC GCCGTCAAGG TGCTCAGCCC GCAGGTGGAC
ATCCTGATCG TGGTTGGCAG CCCGACAAGT TCGAACAGCA ACCGTCTGCG CGAGCTGGCC
GCCAAGCTGG GCACTGAGGC CTACATGGTG GACGATGCCA GCGAGCTGCG GGAGTCCTGG
TTCGAGGGCA AGAGCCGCGT CGGTCTGACG GCCGGCGCCT CGGCCCCGGA GATCCTCGTC
AAGCAGGTGA TAGACCGCAT CCGGGCGCTG GGCGCGGTCT CCGTGCGCAA GATGGACGGC
ATCGAGGAAA CCATCAAGTT TCCGCTGCCC AAGGGCCTGA AGGTCGATGC CCAGGGCCAC
ATGCTGGACG TCGGCGACAG CCAGCTTCAT CAATTGACCT GA
 
Protein sequence
MNTADKRLDE ILLAEPRGFC AGVDRAIEIV ERALTKFGAP IYVRHEIVHN TYVVNELKAK 
GAIFIEELSD VPPGATLVFS AHGVSKAIQD EARARGFQIF DATCPLVTKV HVEVAKLHKE
GYEFIMIGHK GHPEVEGTMG QLDSGIHLVE DVADVARITP SQTERLAVVT QTTLSVDDAA
EISAAVKARF PQVREPKQQD ICYATQNRQD AVKVLSPQVD ILIVVGSPTS SNSNRLRELA
AKLGTEAYMV DDASELRESW FEGKSRVGLT AGASAPEILV KQVIDRIRAL GAVSVRKMDG
IEETIKFPLP KGLKVDAQGH MLDVGDSQLH QLT