Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0951 |
Symbol | ispH |
ID | 4011085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 973754 |
End bp | 974755 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637940631 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_547805 |
Protein GI | 91786853 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.340547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG CAGACAAACG GCTTGACGAA ATCCTGCTCG CGGAGCCGCG CGGCTTTTGC GCCGGTGTCG ACCGGGCCAT TGAAATCGTC GAGCGGGCGC TCACCAAGTT TGGCGCACCG ATCTACGTGC GCCACGAAAT CGTGCACAAC ACCTATGTGG TCAACGAGCT CAAGGCCAAG GGCGCGATCT TTATCGAAGA GCTGTCCGAC GTGCCGCCGG GCGCCACGCT GGTGTTCAGC GCCCATGGCG TGAGCAAGGC CATCCAGGAC GAGGCGCGCG CCCGCGGCTT CCAGATTTTT GATGCCACCT GCCCGCTGGT GACCAAGGTG CACGTCGAAG TGGCCAAGCT GCACAAGGAA GGTTACGAGT TCATCATGAT CGGCCACAAG GGCCACCCCG AGGTGGAGGG CACCATGGGC CAGCTCGACA GCGGCATCCA CCTGGTGGAA GACGTGGCCG ACGTGGCACG CATTACGCCC TCGCAAACCG AGCGGCTGGC CGTGGTGACG CAAACCACGC TGAGCGTGGA TGACGCGGCC GAGATCAGCG CGGCCGTGAA GGCGCGCTTT CCGCAGGTGC GCGAGCCCAA GCAGCAGGAC ATTTGCTACG CCACGCAAAA CCGGCAGGAC GCCGTCAAGG TGCTCAGCCC GCAGGTGGAC ATCCTGATCG TGGTTGGCAG CCCGACAAGT TCGAACAGCA ACCGTCTGCG CGAGCTGGCC GCCAAGCTGG GCACTGAGGC CTACATGGTG GACGATGCCA GCGAGCTGCG GGAGTCCTGG TTCGAGGGCA AGAGCCGCGT CGGTCTGACG GCCGGCGCCT CGGCCCCGGA GATCCTCGTC AAGCAGGTGA TAGACCGCAT CCGGGCGCTG GGCGCGGTCT CCGTGCGCAA GATGGACGGC ATCGAGGAAA CCATCAAGTT TCCGCTGCCC AAGGGCCTGA AGGTCGATGC CCAGGGCCAC ATGCTGGACG TCGGCGACAG CCAGCTTCAT CAATTGACCT GA
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Protein sequence | MNTADKRLDE ILLAEPRGFC AGVDRAIEIV ERALTKFGAP IYVRHEIVHN TYVVNELKAK GAIFIEELSD VPPGATLVFS AHGVSKAIQD EARARGFQIF DATCPLVTKV HVEVAKLHKE GYEFIMIGHK GHPEVEGTMG QLDSGIHLVE DVADVARITP SQTERLAVVT QTTLSVDDAA EISAAVKARF PQVREPKQQD ICYATQNRQD AVKVLSPQVD ILIVVGSPTS SNSNRLRELA AKLGTEAYMV DDASELRESW FEGKSRVGLT AGASAPEILV KQVIDRIRAL GAVSVRKMDG IEETIKFPLP KGLKVDAQGH MLDVGDSQLH QLT
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